NEWS.md

In phylotypr: Classifying DNA Sequences to Taxonomic Groupings

phylotypr 0.1.1

This is a patch release to... update the citation change the license to GPL v3 * make a small change to the behavior of the code for when a k-mer shows up more than once in a sequence

phylotypr 0.1.0

This is the first release version of phylotypr! 🎉

• Functions:
  • read_fasta()
  • read_taxonomy()
  • build_kmer_database()
  • classify_sequence()
  • filter_taxonomy()
  • print_taxonomy()
• Example datasets:
  • trainset9_rdp
  • trainset9_pds
• Vignette:
  • Getting started

phylotypr documentation built on April 3, 2025, 5:51 p.m.