phyndr: Matches Tip and Trait Data
Version 0.1.0

Use topological or taxonomic information to maximize the overlap of phylogenetic and comparative data.

AuthorRich FitzJohn, Matt Pennell and Will Cornwell
Date of publication2015-08-18 21:04:16
MaintainerMatt Pennell <mwpennell@gmail.com>
LicenseBSD_2_clause + file LICENSE
Version0.1.0
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("phyndr")

Getting started

README.md

Popular man pages

phyndr_combn: Generate all distinct sets of tip labels from a phyndr tree
phyndr_n_distinct: Number of distinct trees
phyndr_sample: Sample one distinct set of tip labels from a phyndr tree
phyndr_taxonomy: Phyndr taxonomic
phyndr_topology: phyndr for topo trees
See all...

All man pages Function index File listing

Man pages

phyndr_combn: Generate all distinct sets of tip labels from a phyndr tree
phyndr_n_distinct: Number of distinct trees
phyndr_sample: Sample one distinct set of tip labels from a phyndr tree
phyndr_taxonomy: Phyndr taxonomic
phyndr_topology: phyndr for topo trees

Functions

Files

tests
tests/testthat.R
tests/testthat
tests/testthat/test-utils.R
tests/testthat/pinales.tre
tests/testthat/test-phyndr-topology.R
tests/testthat/helper-phyndr.R
tests/testthat/Conifer-timetree.tre
tests/testthat/test-phyndr-taxonomy.R
tests/testthat/pinales_topotree.tre
tests/testthat/pinales_sub.txt
tests/testthat/pinales.csv
src
src/descendants.c
NAMESPACE
R
R/utils.R
R/utils_phy.R
R/phyndr.R
R/phyndr_taxonomy.R
R/utils_phy_diversitree.R
R/drop_tip.R
R/phyndr_topology.R
README.md
MD5
DESCRIPTION
man
man/phyndr_n_distinct.Rd
man/phyndr_sample.Rd
man/phyndr_taxonomy.Rd
man/phyndr_topology.Rd
man/phyndr_combn.Rd
LICENSE
phyndr documentation built on May 19, 2017, 7:25 a.m.

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