pglmm-profile-LRT: 'pglmm_profile_LRT' tests statistical significance of the...
In phyr: Model Based Phylogenetic Analysis
Description
Usage
Arguments
Value
Description
pglmm_profile_LRT tests statistical significance of the
phylogenetic random effect of binomial models on
species slopes using a likelihood ratio test.
Usage
1
2
3
pglmm_profile_LRT(x, re.number = 0, cpp = TRUE)
communityPGLMM.profile.LRT(x, re.number = 0, cpp = TRUE)
Arguments
x
A fitted model with class communityPGLMM and family "binomial".
re.number
Which random term to test? Can be a vector with length >1
cpp
Whether to use C++ function for optim. Default is TRUE. Ignored if bayes = TRUE.
Value
A list of likelihood, df, and p-value.
phyr documentation built on Jan. 13, 2021, 5:40 p.m.
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Description Usage Arguments Value
Description
pglmm_profile_LRT tests statistical significance of the
phylogenetic random effect of binomial models on
species slopes using a likelihood ratio test.
Usage
1 2 3 | pglmm_profile_LRT(x, re.number = 0, cpp = TRUE)
communityPGLMM.profile.LRT(x, re.number = 0, cpp = TRUE)
|
Arguments
x |
A fitted model with class communityPGLMM and family "binomial". |
re.number |
Which random term to test? Can be a vector with length >1 |
cpp |
Whether to use C++ function for optim. Default is TRUE. Ignored if |
Value
A list of likelihood, df, and p-value.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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