API for picante
Integrating Phylogenies and Ecology
| Global functions | |
|---|---|
| .binomial.pd | Source code |
| .edge.children.var | Source code |
| .edge.children.var.ub | Source code |
| .get.nodes | Source code |
| .node.desc | Source code |
| .node.number | Source code |
| .phylosor.richness | Source code |
| .phylosor.taxaShuffle | Source code |
| .var.pd | Source code |
| .var.pd.ub | Source code |
| IvesGodfray | Man page |
| Kcalc | Man page Source code |
| PCD | Man page |
| `.evolve.trait` | Source code |
| `.match.tree` | Source code |
| `color.plot.phylo` | Source code |
| `comm.phylo.cor` | Source code |
| `comm.phylo.qr` | Source code |
| `df2vec` | Source code |
| `internal2tips` | Source code |
| `matrix2sample` | Source code |
| `node.age` | Source code |
| `randomizeMatrix` | Source code |
| `sample2matrix` | Source code |
| `sortColumns` | Source code |
| `sortRows` | Source code |
| `taxaShuffle` | Source code |
| `tipShuffle` | Source code |
| color.plot.phylo | Man page |
| comdist | Man page Source code |
| comdistnn | Man page |
| comdistnt | Man page Source code |
| comm.phylo.cor | Man page |
| comm.phylo.qr | Man page |
| cor.table | Man page |
| df2vec | Man page |
| ead | Man page Source code |
| evol.distinct | Man page Source code |
| expected.pd | Man page Source code |
| internal2tips | Man page |
| match.comm.dist | Man page Source code |
| match.phylo.comm | Man page Source code |
| match.phylo.data | Man page Source code |
| matrix2sample | Man page |
| mnnd | Man page |
| mntd | Man page Source code |
| mpd | Man page Source code |
| multiPhylosignal | Man page Source code |
| node.age | Man page |
| pblm | Man page Source code |
| pblmpredict | Man page Source code |
| pcd | Man page Source code |
| pd | Man page |
| phyEstimate | Man page Source code |
| phyEstimateDisc | Man page Source code |
| phylocom | Man page |
| phylosignal | Man page Source code |
| phylosor | Man page |
| phylosor.rnd | Man page Source code |
| phylostruct | Man page Source code |
| pic.variance | Man page Source code |
| picante | Man page |
| picante-package | Man page |
| prune.missing | Man page |
| prune.sample | Man page |
| psc | Man page Source code |
| psd | Man page Source code |
| pse | Man page Source code |
| psr | Man page Source code |
| psv | Man page Source code |
| psv.spp | Man page Source code |
| randomizeMatrix | Man page |
| raoD | Man page |
| readsample | Man page |
| sample2matrix | Man page |
| ses.mnnd | Man page |
| ses.mntd | Man page |
| ses.mpd | Man page |
| ses.pd | Man page Source code |
| sortColumns | Man page |
| sortRows | Man page |
| specaccum.psr | Man page |
| species.dist | Man page |
| sppregs | Man page Source code |
| sppregs.plot | Man page Source code |
| tax.distinctiveness | Man page Source code |
| taxaShuffle | Man page |
| tipShuffle | Man page |
| traitgram | Man page Source code |
| unifrac | Man page |
| variance.pd | Man page Source code |
| writesample | Man page |
| writetraits | Man page |
