plinkFile: 'PLINK' (and 'GCTA') File Helpers

Provide function that reads binary genotype produced by 'PLINK' <> into a R matrix, or scan the genotype one variant at a time like apply(), it also provides functions that reads and writes genotype relatedness/kinship matrices created by 'PLINK' <> or 'GCTA' <>. Currently it does not support writing back into 'PLINK' binary, it is best used for bringing data produced by 'PLINK' and 'GCTA' into R environment.

Getting started

Package details

AuthorXiaoran Tong [aut, cre]
MaintainerXiaoran Tong <>
LicenseGPL (>= 2)
Package repositoryView on CRAN
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plinkFile documentation built on April 5, 2020, 5:06 p.m.