plinkFile: 'PLINK' (and 'GCTA') File Helpers

Reads/write binary genotype file compatible with 'PLINK' <> into/from a R matrix; traverse genotype data one windows of variants at a time, like apply() or a for loop; reads/writes genotype relatedness/kinship matrices created by 'PLINK' <> or 'GCTA' <> into/from a R square matrix. It is best used for bringing data produced by 'PLINK' and 'GCTA' into R workflow.

Getting started

Package details

AuthorXiaoran Tong [aut, cre]
MaintainerXiaoran Tong <>
LicenseGPL (>= 2)
Package repositoryView on CRAN
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plinkFile documentation built on Nov. 24, 2023, 5:10 p.m.