Man pages for plinkFile
'PLINK' (and 'GCTA') File Helpers

dbdDecompress Byte Data
gidInfer Sample ID from a symmetric matrix
lcLine Count
readBEDRead BED file
readBIMRead BIM file
readBSMRead Binary Symmetric Matrix (BSM)
readFAMRead FAM file
readGRMRead Genetic Related Matrix (GRM) of GCTA
readIBSRead PLINK Binary IBS matrix
readRELRead PLINK Binary REL matrix
readVCMRead Variant Count Matrix (VCM) accompanying a GCTA GRM
saveBSMSave Symmetric Matrix to Binary
saveGRMSave symmetic matrix to GCTA GRM format.
scanBEDScan genotypes in PLINK BED(s)
testReadBEDTest BED Reader
testReadBSMTest Genetic Relatedness Matrix Reader
testScanBEDTest BED Scanner
plinkFile documentation built on April 5, 2020, 5:06 p.m.