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plsgenomics: PLS Analyses for Genomics
Routines for PLS-based genomic analyses, implementing PLS methods for classification with microarray data and prediction of transcription factor activities from combined ChIP-chip analysis. The >=1.2-1 versions include two new classification methods for microarray data: GSIM and Ridge PLS. The >=1.3 versions includes a new classification method combining variable selection and compression in logistic regression context: logit-SPLS; and an adaptive version of the sparse PLS.
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Package details |
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| Author | Anne-Laure Boulesteix <boulesteix@ibe.med.uni-muenchen.de>, Ghislain Durif <gd.dev@libertymail.net>, Sophie Lambert-Lacroix <sophie.lambert-lacroix@univ-grenoble-alpes.fr>, Julie Peyre <Julie.Peyre@univ-grenoble-alpes.fr>, and Korbinian Strimmer <k.strimmer@imperial.ac.uk>. |
| Maintainer | Ghislain Durif <gd.dev@libertymail.net> |
| License | GPL (>= 2) |
| Version | 1.5-3 |
| URL | https://github.com/gdurif/plsgenomics |
| Package repository | View on CRAN |
| Installation |
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