Man pages for plsgenomics
PLS Analyses for Genomics

ColonGene expression data from Alon et al. (1999)
EcoliEcoli gene expression and connectivity data from Kao et al....
gsimGSIM for binary data
gsim.cvDetermination of the ridge regularization parameter and the...
leukemiaGene expression data from Golub et al. (1999)
logit.splsClassification procedure for binary response based on a...
logit.spls.cvCross-validation procedure to calibrate the parameters...
logit.spls.stabStability selection procedure to estimate probabilities of...
matrix.heatmapHeatmap visualization for matrix
mgsimGSIM for categorical data
mgsim.cvDetermination of the ridge regularization parameter and the...
mrplsRidge Partial Least Square for categorical data
mrpls.cvDetermination of the ridge regularization parameter and the...
multinom.splsClassification procedure for multi-label response based on a...
multinom.spls.cvCross-validation procedure to calibrate the parameters...
multinom.spls.stabStability selection procedure to estimate probabilities of...
plsgenomics-deprecatedDeprecated function(s) in the 'plsgenomics' package
plsgenomics-internalInternal Functions for the 'plsgenomics' package
pls.ldaClassification with PLS Dimension Reduction and Linear...
pls.lda.cvDetermination of the number of latent components to be used...
pls.regressionMultivariate Partial Least Squares Regression
pls.regression.cvDetermination of the number of latent components to be used...
preprocesspreprocess for microarray data
rplsRidge Partial Least Square for binary data
rpls.cvDetermination of the ridge regularization parameter and the...
sample.binGenerates covariate matrix X with correlated block of...
sample.contGenerates design matrix X with correlated block of covariates...
sample.multinomGenerates covariate matrix X with correlated block of...
splsAdaptive Sparse Partial Least Squares (SPLS) regression
spls.cvCross-validation procedure to calibrate the parameters...
spls.stabStability selection procedure to estimate probabilities of...
SRBCTGene expression data from Khan et al. (2001)
stability.selectionStability selection procedure to select covariates for the...
stability.selection.heatmapHeatmap visualization of estimated probabilities of selection...
TFA.estimatePrediction of Transcription Factor Activities using PLS
variable.selectionVariable selection using the PLS weights
plsgenomics documentation built on Aug. 24, 2018, 9:03 a.m.