plsgenomics: PLS Analyses for Genomics

Routines for PLS-based genomic analyses, implementing PLS methods for classification with microarray data and prediction of transcription factor activities from combined ChIP-chip analysis. The >=1.2-1 versions include two new classification methods for microarray data: GSIM and Ridge PLS. The >=1.3 versions includes a new classification method combining variable selection and compression in logistic regression context: logit-SPLS; and an adaptive version of the sparse PLS.

Getting started

Package details

AuthorAnne-Laure Boulesteix <>, Ghislain Durif <>, Sophie Lambert-Lacroix <>, Julie Peyre <>, and Korbinian Strimmer <>.
MaintainerGhislain Durif <>
LicenseGPL (>= 2)
Package repositoryView on CRAN
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plsgenomics documentation built on May 2, 2019, 3:48 p.m.