API for presto
Fast Functions for Differential Expression Using Wilcoxon and AUC
| Global functions | |
|---|---|
| %>% | Man page |
| collapse_counts | Man page Source code |
| compute_hash | Man page Source code |
| compute_pval | Source code |
| compute_ustat_sparse | Source code |
| cpp_in_place_rank_mean | Source code |
| cpp_nnzeroGroups_dense | Source code |
| cpp_nnzeroGroups_dense_T | Source code |
| cpp_nnzeroGroups_dgc | Source code |
| cpp_nnzeroGroups_dgc_T | Source code |
| cpp_rank_matrix_dense | Source code |
| cpp_rank_matrix_dgc | Source code |
| cpp_sumGroups_dense | Source code |
| cpp_sumGroups_dense_T | Source code |
| cpp_sumGroups_dgc | Source code |
| cpp_sumGroups_dgc_T | Source code |
| cpp_sumGroups_nnz_dense_T | Source code |
| cpp_wilcox_stats_dgc | Source code |
| group_codes | Source code |
| nnzeroGroups | Man page Source code |
| nnzeroGroups.dgCMatrix | Man page Source code |
| nnzeroGroups.matrix | Man page Source code |
| presto | Man page |
| presto-package | Man page |
| pseudobulk_deseq2 | Man page Source code |
| pseudobulk_one_vs_all | Man page Source code |
| pseudobulk_pairwise | Man page Source code |
| pseudobulk_within | Man page Source code |
| rank_matrix | Man page Source code |
| rank_matrix.dgCMatrix | Man page Source code |
| rank_matrix.matrix | Man page Source code |
| realize_block | Source code |
| stop_wilcox_na | Source code |
| sumGroups | Man page Source code |
| sumGroups.dgCMatrix | Man page Source code |
| sumGroups.matrix | Man page Source code |
| summarize_dge_pairs | Man page Source code |
| tidy_results | Source code |
| top_markers | Man page Source code |
| top_markers_dds | Man page Source code |
| toy_counts | Source code |
| toy_sce | Man page Source code |
| toy_seurat | Man page Source code |
| wilcox_stats_delayed | Source code |
| wilcox_stats_matrix | Source code |
| wilcoxauc | Man page Source code |
| wilcoxauc.Seurat | Man page Source code |
| wilcoxauc.SingleCellExperiment | Man page Source code |
| wilcoxauc.default | Man page Source code |
| wilcoxauc.seurat | Man page Source code |
