process: External process
In processx: Execute and Control System Processes
process R Documentation
External process
Description
Managing external processes from R is not trivial, and this
class aims to help with this deficiency. It is essentially a small
wrapper around the system base R function, to return the process
id of the started process, and set its standard output and error
streams. The process id is then used to manage the process.
Batch files
Running Windows batch files (.bat or .cmd files) may be complicated
because of the cmd.exe command line parsing rules. For example you
cannot easily have whitespace in both the command (path) and one of the
arguments. To work around these limitations you need to start a
cmd.exe shell explicitly and use its call command. For example:
process$new("cmd.exe", c("/c", "call", bat_file, "arg 1", "arg 2"))
This works even if bat_file contains whitespace characters.
For more information about this, see this processx issue:
https://github.com/r-lib/processx/issues/301
The detailed parsing rules are at
https://docs.microsoft.com/en-us/windows-server/administration/windows-commands/cmd
A very good practical guide is at
https://ss64.com/nt/syntax-esc.html
Polling
The poll_io() function polls the standard output and standard
error connections of a process, with a timeout. If there is output
in either of them, or they are closed (e.g. because the process exits)
poll_io() returns immediately.
In addition to polling a single process, the poll() function
can poll the output of several processes, and returns as soon as any
of them has generated output (or exited).
Cleaning up background processes
processx kills processes that are not referenced any more (if cleanup
is set to TRUE), or the whole subprocess tree (if cleanup_tree is
also set to TRUE).
The cleanup happens when the references of the processes object are
garbage collected. To clean up earlier, you can call the kill() or
kill_tree() method of the process(es), from an on.exit() expression,
or an error handler:
process_manager <- function() {
on.exit({
try(p1$kill(), silent = TRUE)
try(p2$kill(), silent = TRUE)
}, add = TRUE)
p1 <- process$new("sleep", "3")
p2 <- process$new("sleep", "10")
p1$wait()
p2$wait()
}
process_manager()
If you interrupt process_manager() or an error happens then both p1
and p2 are cleaned up immediately. Their connections will also be
closed. The same happens at a regular exit.
Methods
Public methods
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Method new()
Start a new process in the background, and then return immediately.
Usage
process$new(
command = NULL,
args = character(),
stdin = NULL,
stdout = NULL,
stderr = NULL,
pty = FALSE,
pty_options = list(),
connections = list(),
poll_connection = NULL,
env = NULL,
cleanup = TRUE,
cleanup_tree = FALSE,
wd = NULL,
echo_cmd = FALSE,
supervise = FALSE,
windows_verbatim_args = FALSE,
windows_hide_window = FALSE,
windows_detached_process = !cleanup,
encoding = "",
post_process = NULL
)
Arguments
commandCharacter scalar, the command to run.
Note that this argument is not passed to a shell, so no
tilde-expansion or variable substitution is performed on it.
It should not be quoted with base::shQuote(). See
base::normalizePath() for tilde-expansion. If you want to run
.bat or .cmd files on Windows, make sure you read the
'Batch files' section above.
argsCharacter vector, arguments to the command. They will be
passed to the process as is, without a shell transforming them,
They don't need to be escaped.
stdinWhat to do with the standard input. Possible values:
-
NULL: set to the null device, i.e. no standard input is
provided;
a file name, use this file as standard input;
-
"|": create a (writeable) connection for stdin.
-
"" (empty string): inherit it from the main R process. If the
main R process does not have a standard input stream, e.g. in
RGui on Windows, then an error is thrown.
stdoutWhat to do with the standard output. Possible values:
-
NULL: discard it;
A string, redirect it to this file.
Note that if you specify a relative path, it will be relative to
the current working directory, even if you specify another
directory in the wd argument. (See issue 324.)
-
"|": create a connection for it.
-
"" (empty string): inherit it from the main R process. If the
main R process does not have a standard output stream, e.g. in
RGui on Windows, then an error is thrown.
stderrWhat to do with the standard error. Possible values:
-
NULL: discard it.
A string, redirect it to this file.
Note that if you specify a relative path, it will be relative to
the current working directory, even if you specify another
directory in the wd argument. (See issue 324.)
-
"|": create a connection for it.
-
"2>&1": redirect it to the same connection (i.e. pipe or file)
as stdout. "2>&1" is a way to keep standard output and error
correctly interleaved.
-
"" (empty string): inherit it from the main R process. If the
main R process does not have a standard error stream, e.g. in
RGui on Windows, then an error is thrown.
ptyWhether to create a pseudo terminal (pty) for the
background process. This is currently only supported on Unix
systems, but not supported on Solaris.
If it is TRUE, then the stdin, stdout and stderr arguments
must be NULL. If a pseudo terminal is created, then processx
will create pipes for standard input and standard output. There is
no separate pipe for standard error, because there is no way to
distinguish between stdout and stderr on a pty. Note that the
standard output connection of the pty is blocking, so we always
poll the standard output connection before reading from it using
the $read_output() method. Also, because $read_output_lines()
could still block if no complete line is available, this function
always fails if the process has a pty. Use $read_output() to
read from ptys.
pty_optionsUnix pseudo terminal options, a named list. see
default_pty_options() for details and defaults.
connectionsA list of processx connections to pass to the
child process. This is an experimental feature currently.
poll_connectionWhether to create an extra connection to the
process that allows polling, even if the standard input and
standard output are not pipes. If this is NULL (the default),
then this connection will be only created if standard output and
standard error are not pipes, and connections is an empty list.
If the poll connection is created, you can query it via
p$get_poll_connection() and it is also included in the response
to p$poll_io() and poll(). The numeric file descriptor of the
poll connection comes right after stderr (2), and the
connections listed in connections.
envEnvironment variables of the child process. If NULL,
the parent's environment is inherited. On Windows, many programs
cannot function correctly if some environment variables are not
set, so we always set HOMEDRIVE, HOMEPATH, LOGONSERVER,
PATH, SYSTEMDRIVE, SYSTEMROOT, TEMP, USERDOMAIN,
USERNAME, USERPROFILE and WINDIR. To append new environment
variables to the ones set in the current process, specify
"current" in env, without a name, and the appended ones with
names. The appended ones can overwrite the current ones.
cleanupWhether to kill the process when the process
object is garbage collected.
cleanup_treeWhether to kill the process and its child
process tree when the process object is garbage collected.
wdWorking directory of the process. It must exist.
If NULL, then the current working directory is used.
echo_cmdWhether to print the command to the screen before
running it.
superviseWhether to register the process with a supervisor.
If TRUE, the supervisor will ensure that the process is
killed when the R process exits.
windows_verbatim_argsWhether to omit quoting the arguments
on Windows. It is ignored on other platforms.
windows_hide_windowWhether to hide the application's window
on Windows. It is ignored on other platforms.
windows_detached_processWhether to use the
DETACHED_PROCESS flag on Windows. If this is TRUE, then
the child process will have no attached console, even if the
parent had one.
encodingThe encoding to assume for stdin, stdout and
stderr. By default the encoding of the current locale is
used. Note that processx always reencodes the output of the
stdout and stderr streams in UTF-8 currently.
If you want to read them without any conversion, on all platforms,
specify "UTF-8" as encoding.
post_processAn optional function to run when the process has
finished. Currently it only runs if $get_result() is called.
It is only run once.
Returns
R6 object representing the process.
Method finalize()
Cleanup method that is called when the process object is garbage
collected. If requested so in the process constructor, then it
eliminates all processes in the process's subprocess tree.
Usage
process$finalize()
Method kill()
Terminate the process. It also terminate all of its child
processes, except if they have created a new process group (on Unix),
or job object (on Windows). It returns TRUE if the process
was terminated, and FALSE if it was not (because it was
already finished/dead when processx tried to terminate it).
Usage
process$kill(grace = 0.1, close_connections = TRUE)
Arguments
graceCurrently not used.
close_connectionsWhether to close standard input, standard
output, standard error connections and the poll connection, after
killing the process.
Method kill_tree()
Process tree cleanup. It terminates the process
(if still alive), together with any child (or grandchild, etc.)
processes. It uses the ps package, so that needs to be installed,
and ps needs to support the current platform as well. Process tree
cleanup works by marking the process with an environment variable,
which is inherited in all child processes. This allows finding
descendents, even if they are orphaned, i.e. they are not connected
to the root of the tree cleanup in the process tree any more.
$kill_tree() returns a named integer vector of the process ids that
were killed, the names are the names of the processes (e.g. "sleep",
"notepad.exe", "Rterm.exe", etc.).
Usage
process$kill_tree(grace = 0.1, close_connections = TRUE)
Arguments
graceCurrently not used.
close_connectionsWhether to close standard input, standard
output, standard error connections and the poll connection, after
killing the process.
Method signal()
Send a signal to the process. On Windows only the
SIGINT, SIGTERM and SIGKILL signals are interpreted,
and the special 0 signal. The first three all kill the process. The 0
signal returns TRUE if the process is alive, and FALSE
otherwise. On Unix all signals are supported that the OS supports,
and the 0 signal as well.
Usage
process$signal(signal)
Arguments
signalAn integer scalar, the id of the signal to send to
the process. See tools::pskill() for the list of signals.
Method interrupt()
Send an interrupt to the process. On Unix this is a
SIGINT signal, and it is usually equivalent to pressing CTRL+C at
the terminal prompt. On Windows, it is a CTRL+BREAK keypress.
Applications may catch these events. By default they will quit.
Usage
process$interrupt()
Method get_pid()
Query the process id.
Usage
process$get_pid()
Returns
Integer scalar, the process id of the process.
Method is_alive()
Check if the process is alive.
Usage
process$is_alive()
Returns
Logical scalar.
Method wait()
Wait until the process finishes, or a timeout happens.
Note that if the process never finishes, and the timeout is infinite
(the default), then R will never regain control. In some rare cases,
$wait() might take a bit longer than specified to time out. This
happens on Unix, when another package overwrites the processx
SIGCHLD signal handler, after the processx process has started.
One such package is parallel, if used with fork clusters, e.g.
through parallel::mcparallel().
Usage
process$wait(timeout = -1)
Arguments
timeoutTimeout in milliseconds, for the wait or the I/O
polling.
Returns
It returns the process itself, invisibly.
Method get_exit_status()
$get_exit_status returns the exit code of the process if it has
finished and NULL otherwise. On Unix, in some rare cases, the exit
status might be NA. This happens if another package (or R itself)
overwrites the processx SIGCHLD handler, after the processx process
has started. In these cases processx cannot determine the real exit
status of the process. One such package is parallel, if used with
fork clusters, e.g. through the parallel::mcparallel() function.
Usage
process$get_exit_status()
Method format()
format(p) or p$format() creates a string representation of the
process, usually for printing.
Usage
process$format()
Method print()
print(p) or p$print() shows some information about the
process on the screen, whether it is running and it's process id, etc.
Usage
process$print()
Method get_start_time()
$get_start_time() returns the time when the process was
started.
Usage
process$get_start_time()
Method is_supervised()
$is_supervised() returns whether the process is being tracked by
supervisor process.
Usage
process$is_supervised()
Method supervise()
$supervise() if passed TRUE, tells the supervisor to start
tracking the process. If FALSE, tells the supervisor to stop
tracking the process. Note that even if the supervisor is disabled
for a process, if it was started with cleanup = TRUE, the process
will still be killed when the object is garbage collected.
Usage
process$supervise(status)
Arguments
statusWhether to turn on of off the supervisor for this
process.
Method read_output()
$read_output() reads from the standard output connection of the
process. If the standard output connection was not requested, then
then it returns an error. It uses a non-blocking text connection. This
will work only if stdout="|" was used. Otherwise, it will throw an
error.
Usage
process$read_output(n = -1)
Arguments
nNumber of characters or lines to read.
Method read_error()
$read_error() is similar to $read_output, but it reads
from the standard error stream.
Usage
process$read_error(n = -1)
Arguments
nNumber of characters or lines to read.
Method read_output_lines()
$read_output_lines() reads lines from standard output connection
of the process. If the standard output connection was not requested,
then it returns an error. It uses a non-blocking text connection.
This will work only if stdout="|" was used. Otherwise, it will
throw an error.
Usage
process$read_output_lines(n = -1)
Arguments
nNumber of characters or lines to read.
Method read_error_lines()
$read_error_lines() is similar to $read_output_lines, but
it reads from the standard error stream.
Usage
process$read_error_lines(n = -1)
Arguments
nNumber of characters or lines to read.
Method is_incomplete_output()
$is_incomplete_output() return FALSE if the other end of
the standard output connection was closed (most probably because the
process exited). It return TRUE otherwise.
Usage
process$is_incomplete_output()
Method is_incomplete_error()
$is_incomplete_error() return FALSE if the other end of
the standard error connection was closed (most probably because the
process exited). It return TRUE otherwise.
Usage
process$is_incomplete_error()
Method has_input_connection()
$has_input_connection() return TRUE if there is a connection
object for standard input; in other words, if stdout="|". It returns
FALSE otherwise.
Usage
process$has_input_connection()
Method has_output_connection()
$has_output_connection() returns TRUE if there is a connection
object for standard output; in other words, if stdout="|". It returns
FALSE otherwise.
Usage
process$has_output_connection()
Method has_error_connection()
$has_error_connection() returns TRUE if there is a connection
object for standard error; in other words, if stderr="|". It returns
FALSE otherwise.
Usage
process$has_error_connection()
Method has_poll_connection()
$has_poll_connection() return TRUE if there is a poll connection,
FALSE otherwise.
Usage
process$has_poll_connection()
Method get_input_connection()
$get_input_connection() returns a connection object, to the
standard input stream of the process.
Usage
process$get_input_connection()
Method get_output_connection()
$get_output_connection() returns a connection object, to the
standard output stream of the process.
Usage
process$get_output_connection()
Method get_error_connection()
$get_error_conneciton() returns a connection object, to the
standard error stream of the process.
Usage
process$get_error_connection()
Method read_all_output()
$read_all_output() waits for all standard output from the process.
It does not return until the process has finished.
Note that this process involves waiting for the process to finish,
polling for I/O and potentially several readLines() calls.
It returns a character scalar. This will return content only if
stdout="|" was used. Otherwise, it will throw an error.
Usage
process$read_all_output()
Method read_all_error()
$read_all_error() waits for all standard error from the process.
It does not return until the process has finished.
Note that this process involves waiting for the process to finish,
polling for I/O and potentially several readLines() calls.
It returns a character scalar. This will return content only if
stderr="|" was used. Otherwise, it will throw an error.
Usage
process$read_all_error()
Method read_all_output_lines()
$read_all_output_lines() waits for all standard output lines
from a process. It does not return until the process has finished.
Note that this process involves waiting for the process to finish,
polling for I/O and potentially several readLines() calls.
It returns a character vector. This will return content only if
stdout="|" was used. Otherwise, it will throw an error.
Usage
process$read_all_output_lines()
Method read_all_error_lines()
$read_all_error_lines() waits for all standard error lines from
a process. It does not return until the process has finished.
Note that this process involves waiting for the process to finish,
polling for I/O and potentially several readLines() calls.
It returns a character vector. This will return content only if
stderr="|" was used. Otherwise, it will throw an error.
Usage
process$read_all_error_lines()
Method write_input()
$write_input() writes the character vector (separated by sep) to
the standard input of the process. It will be converted to the specified
encoding. This operation is non-blocking, and it will return, even if
the write fails (because the write buffer is full), or if it suceeds
partially (i.e. not the full string is written). It returns with a raw
vector, that contains the bytes that were not written. You can supply
this raw vector to $write_input() again, until it is fully written,
and then the return value will be raw(0) (invisibly).
Usage
process$write_input(str, sep = "\n")
Arguments
strCharacter or raw vector to write to the standard input
of the process. If a character vector with a marked encoding,
it will be converted to encoding.
sepSeparator to add between str elements if it is a
character vector. It is ignored if str is a raw vector.
Returns
Leftover text (as a raw vector), that was not written.
Method get_input_file()
$get_input_file() if the stdin argument was a filename,
this returns the absolute path to the file. If stdin was "|" or
NULL, this simply returns that value.
Usage
process$get_input_file()
Method get_output_file()
$get_output_file() if the stdout argument was a filename,
this returns the absolute path to the file. If stdout was "|" or
NULL, this simply returns that value.
Usage
process$get_output_file()
Method get_error_file()
$get_error_file() if the stderr argument was a filename,
this returns the absolute path to the file. If stderr was "|" or
NULL, this simply returns that value.
Usage
process$get_error_file()
Method poll_io()
$poll_io() polls the process's connections for I/O. See more in
the Polling section, and see also the poll() function
to poll on multiple processes.
Usage
process$poll_io(timeout)
Arguments
timeoutTimeout in milliseconds, for the wait or the I/O
polling.
Method get_poll_connection()
$get_poll_connetion() returns the poll connection, if the process has
one.
Usage
process$get_poll_connection()
Method get_result()
$get_result() returns the result of the post processesing function.
It can only be called once the process has finished. If the process has
no post-processing function, then NULL is returned.
Usage
process$get_result()
Method as_ps_handle()
$as_ps_handle() returns a ps::ps_handle object, corresponding to
the process.
Usage
process$as_ps_handle()
Method get_name()
Calls ps::ps_name() to get the process name.
Usage
process$get_name()
Method get_exe()
Calls ps::ps_exe() to get the path of the executable.
Usage
process$get_exe()
Method get_cmdline()
Calls ps::ps_cmdline() to get the command line.
Usage
process$get_cmdline()
Method get_status()
Calls ps::ps_status() to get the process status.
Usage
process$get_status()
Method get_username()
calls ps::ps_username() to get the username.
Usage
process$get_username()
Method get_wd()
Calls ps::ps_cwd() to get the current working directory.
Usage
process$get_wd()
Method get_cpu_times()
Calls ps::ps_cpu_times() to get CPU usage data.
Usage
process$get_cpu_times()
Method get_memory_info()
Calls ps::ps_memory_info() to get memory data.
Usage
process$get_memory_info()
Method suspend()
Calls ps::ps_suspend() to suspend the process.
Usage
process$suspend()
Method resume()
Calls ps::ps_resume() to resume a suspended process.
Usage
process$resume()
Examples
p <- process$new("sleep", "2")
p$is_alive()
p
p$kill()
p$is_alive()
p <- process$new("sleep", "1")
p$is_alive()
Sys.sleep(2)
p$is_alive()
processx documentation built on May 29, 2024, 5:53 a.m.
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| process | R Documentation |
External process
Description
Managing external processes from R is not trivial, and this
class aims to help with this deficiency. It is essentially a small
wrapper around the system base R function, to return the process
id of the started process, and set its standard output and error
streams. The process id is then used to manage the process.
Batch files
Running Windows batch files (.bat or .cmd files) may be complicated
because of the cmd.exe command line parsing rules. For example you
cannot easily have whitespace in both the command (path) and one of the
arguments. To work around these limitations you need to start a
cmd.exe shell explicitly and use its call command. For example:
process$new("cmd.exe", c("/c", "call", bat_file, "arg 1", "arg 2"))
This works even if bat_file contains whitespace characters.
For more information about this, see this processx issue:
https://github.com/r-lib/processx/issues/301
The detailed parsing rules are at https://docs.microsoft.com/en-us/windows-server/administration/windows-commands/cmd
A very good practical guide is at https://ss64.com/nt/syntax-esc.html
Polling
The poll_io() function polls the standard output and standard
error connections of a process, with a timeout. If there is output
in either of them, or they are closed (e.g. because the process exits)
poll_io() returns immediately.
In addition to polling a single process, the poll() function
can poll the output of several processes, and returns as soon as any
of them has generated output (or exited).
Cleaning up background processes
processx kills processes that are not referenced any more (if cleanup
is set to TRUE), or the whole subprocess tree (if cleanup_tree is
also set to TRUE).
The cleanup happens when the references of the processes object are
garbage collected. To clean up earlier, you can call the kill() or
kill_tree() method of the process(es), from an on.exit() expression,
or an error handler:
process_manager <- function() {
on.exit({
try(p1$kill(), silent = TRUE)
try(p2$kill(), silent = TRUE)
}, add = TRUE)
p1 <- process$new("sleep", "3")
p2 <- process$new("sleep", "10")
p1$wait()
p2$wait()
}
process_manager()
If you interrupt process_manager() or an error happens then both p1
and p2 are cleaned up immediately. Their connections will also be
closed. The same happens at a regular exit.
Methods
Public methods
Method new()
Start a new process in the background, and then return immediately.
Usage
process$new( command = NULL, args = character(), stdin = NULL, stdout = NULL, stderr = NULL, pty = FALSE, pty_options = list(), connections = list(), poll_connection = NULL, env = NULL, cleanup = TRUE, cleanup_tree = FALSE, wd = NULL, echo_cmd = FALSE, supervise = FALSE, windows_verbatim_args = FALSE, windows_hide_window = FALSE, windows_detached_process = !cleanup, encoding = "", post_process = NULL )
Arguments
commandCharacter scalar, the command to run. Note that this argument is not passed to a shell, so no tilde-expansion or variable substitution is performed on it. It should not be quoted with
base::shQuote(). Seebase::normalizePath()for tilde-expansion. If you want to run.bator.cmdfiles on Windows, make sure you read the 'Batch files' section above.argsCharacter vector, arguments to the command. They will be passed to the process as is, without a shell transforming them, They don't need to be escaped.
stdinWhat to do with the standard input. Possible values:
-
NULL: set to the null device, i.e. no standard input is provided; a file name, use this file as standard input;
-
"|": create a (writeable) connection for stdin. -
""(empty string): inherit it from the main R process. If the main R process does not have a standard input stream, e.g. in RGui on Windows, then an error is thrown.
-
stdoutWhat to do with the standard output. Possible values:
-
NULL: discard it; A string, redirect it to this file. Note that if you specify a relative path, it will be relative to the current working directory, even if you specify another directory in the
wdargument. (See issue 324.)-
"|": create a connection for it. -
""(empty string): inherit it from the main R process. If the main R process does not have a standard output stream, e.g. in RGui on Windows, then an error is thrown.
-
stderrWhat to do with the standard error. Possible values:
-
NULL: discard it. A string, redirect it to this file. Note that if you specify a relative path, it will be relative to the current working directory, even if you specify another directory in the
wdargument. (See issue 324.)-
"|": create a connection for it. -
"2>&1": redirect it to the same connection (i.e. pipe or file) asstdout."2>&1"is a way to keep standard output and error correctly interleaved. -
""(empty string): inherit it from the main R process. If the main R process does not have a standard error stream, e.g. in RGui on Windows, then an error is thrown.
-
ptyWhether to create a pseudo terminal (pty) for the background process. This is currently only supported on Unix systems, but not supported on Solaris. If it is
TRUE, then thestdin,stdoutandstderrarguments must beNULL. If a pseudo terminal is created, then processx will create pipes for standard input and standard output. There is no separate pipe for standard error, because there is no way to distinguish between stdout and stderr on a pty. Note that the standard output connection of the pty is blocking, so we always poll the standard output connection before reading from it using the$read_output()method. Also, because$read_output_lines()could still block if no complete line is available, this function always fails if the process has a pty. Use$read_output()to read from ptys.pty_optionsUnix pseudo terminal options, a named list. see
default_pty_options()for details and defaults.connectionsA list of processx connections to pass to the child process. This is an experimental feature currently.
poll_connectionWhether to create an extra connection to the process that allows polling, even if the standard input and standard output are not pipes. If this is
NULL(the default), then this connection will be only created if standard output and standard error are not pipes, andconnectionsis an empty list. If the poll connection is created, you can query it viap$get_poll_connection()and it is also included in the response top$poll_io()andpoll(). The numeric file descriptor of the poll connection comes right afterstderr(2), and the connections listed inconnections.envEnvironment variables of the child process. If
NULL, the parent's environment is inherited. On Windows, many programs cannot function correctly if some environment variables are not set, so we always setHOMEDRIVE,HOMEPATH,LOGONSERVER,PATH,SYSTEMDRIVE,SYSTEMROOT,TEMP,USERDOMAIN,USERNAME,USERPROFILEandWINDIR. To append new environment variables to the ones set in the current process, specify"current"inenv, without a name, and the appended ones with names. The appended ones can overwrite the current ones.cleanupWhether to kill the process when the
processobject is garbage collected.cleanup_treeWhether to kill the process and its child process tree when the
processobject is garbage collected.wdWorking directory of the process. It must exist. If
NULL, then the current working directory is used.echo_cmdWhether to print the command to the screen before running it.
superviseWhether to register the process with a supervisor. If
TRUE, the supervisor will ensure that the process is killed when the R process exits.windows_verbatim_argsWhether to omit quoting the arguments on Windows. It is ignored on other platforms.
windows_hide_windowWhether to hide the application's window on Windows. It is ignored on other platforms.
windows_detached_processWhether to use the
DETACHED_PROCESSflag on Windows. If this isTRUE, then the child process will have no attached console, even if the parent had one.encodingThe encoding to assume for
stdin,stdoutandstderr. By default the encoding of the current locale is used. Note thatprocessxalways reencodes the output of thestdoutandstderrstreams in UTF-8 currently. If you want to read them without any conversion, on all platforms, specify"UTF-8"as encoding.post_processAn optional function to run when the process has finished. Currently it only runs if
$get_result()is called. It is only run once.
Returns
R6 object representing the process.
Method finalize()
Cleanup method that is called when the process object is garbage
collected. If requested so in the process constructor, then it
eliminates all processes in the process's subprocess tree.
Usage
process$finalize()
Method kill()
Terminate the process. It also terminate all of its child
processes, except if they have created a new process group (on Unix),
or job object (on Windows). It returns TRUE if the process
was terminated, and FALSE if it was not (because it was
already finished/dead when processx tried to terminate it).
Usage
process$kill(grace = 0.1, close_connections = TRUE)
Arguments
graceCurrently not used.
close_connectionsWhether to close standard input, standard output, standard error connections and the poll connection, after killing the process.
Method kill_tree()
Process tree cleanup. It terminates the process
(if still alive), together with any child (or grandchild, etc.)
processes. It uses the ps package, so that needs to be installed,
and ps needs to support the current platform as well. Process tree
cleanup works by marking the process with an environment variable,
which is inherited in all child processes. This allows finding
descendents, even if they are orphaned, i.e. they are not connected
to the root of the tree cleanup in the process tree any more.
$kill_tree() returns a named integer vector of the process ids that
were killed, the names are the names of the processes (e.g. "sleep",
"notepad.exe", "Rterm.exe", etc.).
Usage
process$kill_tree(grace = 0.1, close_connections = TRUE)
Arguments
graceCurrently not used.
close_connectionsWhether to close standard input, standard output, standard error connections and the poll connection, after killing the process.
Method signal()
Send a signal to the process. On Windows only the
SIGINT, SIGTERM and SIGKILL signals are interpreted,
and the special 0 signal. The first three all kill the process. The 0
signal returns TRUE if the process is alive, and FALSE
otherwise. On Unix all signals are supported that the OS supports,
and the 0 signal as well.
Usage
process$signal(signal)
Arguments
signalAn integer scalar, the id of the signal to send to the process. See
tools::pskill()for the list of signals.
Method interrupt()
Send an interrupt to the process. On Unix this is a
SIGINT signal, and it is usually equivalent to pressing CTRL+C at
the terminal prompt. On Windows, it is a CTRL+BREAK keypress.
Applications may catch these events. By default they will quit.
Usage
process$interrupt()
Method get_pid()
Query the process id.
Usage
process$get_pid()
Returns
Integer scalar, the process id of the process.
Method is_alive()
Check if the process is alive.
Usage
process$is_alive()
Returns
Logical scalar.
Method wait()
Wait until the process finishes, or a timeout happens.
Note that if the process never finishes, and the timeout is infinite
(the default), then R will never regain control. In some rare cases,
$wait() might take a bit longer than specified to time out. This
happens on Unix, when another package overwrites the processx
SIGCHLD signal handler, after the processx process has started.
One such package is parallel, if used with fork clusters, e.g.
through parallel::mcparallel().
Usage
process$wait(timeout = -1)
Arguments
timeoutTimeout in milliseconds, for the wait or the I/O polling.
Returns
It returns the process itself, invisibly.
Method get_exit_status()
$get_exit_status returns the exit code of the process if it has
finished and NULL otherwise. On Unix, in some rare cases, the exit
status might be NA. This happens if another package (or R itself)
overwrites the processx SIGCHLD handler, after the processx process
has started. In these cases processx cannot determine the real exit
status of the process. One such package is parallel, if used with
fork clusters, e.g. through the parallel::mcparallel() function.
Usage
process$get_exit_status()
Method format()
format(p) or p$format() creates a string representation of the
process, usually for printing.
Usage
process$format()
Method print()
print(p) or p$print() shows some information about the
process on the screen, whether it is running and it's process id, etc.
Usage
process$print()
Method get_start_time()
$get_start_time() returns the time when the process was
started.
Usage
process$get_start_time()
Method is_supervised()
$is_supervised() returns whether the process is being tracked by
supervisor process.
Usage
process$is_supervised()
Method supervise()
$supervise() if passed TRUE, tells the supervisor to start
tracking the process. If FALSE, tells the supervisor to stop
tracking the process. Note that even if the supervisor is disabled
for a process, if it was started with cleanup = TRUE, the process
will still be killed when the object is garbage collected.
Usage
process$supervise(status)
Arguments
statusWhether to turn on of off the supervisor for this process.
Method read_output()
$read_output() reads from the standard output connection of the
process. If the standard output connection was not requested, then
then it returns an error. It uses a non-blocking text connection. This
will work only if stdout="|" was used. Otherwise, it will throw an
error.
Usage
process$read_output(n = -1)
Arguments
nNumber of characters or lines to read.
Method read_error()
$read_error() is similar to $read_output, but it reads
from the standard error stream.
Usage
process$read_error(n = -1)
Arguments
nNumber of characters or lines to read.
Method read_output_lines()
$read_output_lines() reads lines from standard output connection
of the process. If the standard output connection was not requested,
then it returns an error. It uses a non-blocking text connection.
This will work only if stdout="|" was used. Otherwise, it will
throw an error.
Usage
process$read_output_lines(n = -1)
Arguments
nNumber of characters or lines to read.
Method read_error_lines()
$read_error_lines() is similar to $read_output_lines, but
it reads from the standard error stream.
Usage
process$read_error_lines(n = -1)
Arguments
nNumber of characters or lines to read.
Method is_incomplete_output()
$is_incomplete_output() return FALSE if the other end of
the standard output connection was closed (most probably because the
process exited). It return TRUE otherwise.
Usage
process$is_incomplete_output()
Method is_incomplete_error()
$is_incomplete_error() return FALSE if the other end of
the standard error connection was closed (most probably because the
process exited). It return TRUE otherwise.
Usage
process$is_incomplete_error()
Method has_input_connection()
$has_input_connection() return TRUE if there is a connection
object for standard input; in other words, if stdout="|". It returns
FALSE otherwise.
Usage
process$has_input_connection()
Method has_output_connection()
$has_output_connection() returns TRUE if there is a connection
object for standard output; in other words, if stdout="|". It returns
FALSE otherwise.
Usage
process$has_output_connection()
Method has_error_connection()
$has_error_connection() returns TRUE if there is a connection
object for standard error; in other words, if stderr="|". It returns
FALSE otherwise.
Usage
process$has_error_connection()
Method has_poll_connection()
$has_poll_connection() return TRUE if there is a poll connection,
FALSE otherwise.
Usage
process$has_poll_connection()
Method get_input_connection()
$get_input_connection() returns a connection object, to the
standard input stream of the process.
Usage
process$get_input_connection()
Method get_output_connection()
$get_output_connection() returns a connection object, to the
standard output stream of the process.
Usage
process$get_output_connection()
Method get_error_connection()
$get_error_conneciton() returns a connection object, to the
standard error stream of the process.
Usage
process$get_error_connection()
Method read_all_output()
$read_all_output() waits for all standard output from the process.
It does not return until the process has finished.
Note that this process involves waiting for the process to finish,
polling for I/O and potentially several readLines() calls.
It returns a character scalar. This will return content only if
stdout="|" was used. Otherwise, it will throw an error.
Usage
process$read_all_output()
Method read_all_error()
$read_all_error() waits for all standard error from the process.
It does not return until the process has finished.
Note that this process involves waiting for the process to finish,
polling for I/O and potentially several readLines() calls.
It returns a character scalar. This will return content only if
stderr="|" was used. Otherwise, it will throw an error.
Usage
process$read_all_error()
Method read_all_output_lines()
$read_all_output_lines() waits for all standard output lines
from a process. It does not return until the process has finished.
Note that this process involves waiting for the process to finish,
polling for I/O and potentially several readLines() calls.
It returns a character vector. This will return content only if
stdout="|" was used. Otherwise, it will throw an error.
Usage
process$read_all_output_lines()
Method read_all_error_lines()
$read_all_error_lines() waits for all standard error lines from
a process. It does not return until the process has finished.
Note that this process involves waiting for the process to finish,
polling for I/O and potentially several readLines() calls.
It returns a character vector. This will return content only if
stderr="|" was used. Otherwise, it will throw an error.
Usage
process$read_all_error_lines()
Method write_input()
$write_input() writes the character vector (separated by sep) to
the standard input of the process. It will be converted to the specified
encoding. This operation is non-blocking, and it will return, even if
the write fails (because the write buffer is full), or if it suceeds
partially (i.e. not the full string is written). It returns with a raw
vector, that contains the bytes that were not written. You can supply
this raw vector to $write_input() again, until it is fully written,
and then the return value will be raw(0) (invisibly).
Usage
process$write_input(str, sep = "\n")
Arguments
strCharacter or raw vector to write to the standard input of the process. If a character vector with a marked encoding, it will be converted to
encoding.sepSeparator to add between
strelements if it is a character vector. It is ignored ifstris a raw vector.
Returns
Leftover text (as a raw vector), that was not written.
Method get_input_file()
$get_input_file() if the stdin argument was a filename,
this returns the absolute path to the file. If stdin was "|" or
NULL, this simply returns that value.
Usage
process$get_input_file()
Method get_output_file()
$get_output_file() if the stdout argument was a filename,
this returns the absolute path to the file. If stdout was "|" or
NULL, this simply returns that value.
Usage
process$get_output_file()
Method get_error_file()
$get_error_file() if the stderr argument was a filename,
this returns the absolute path to the file. If stderr was "|" or
NULL, this simply returns that value.
Usage
process$get_error_file()
Method poll_io()
$poll_io() polls the process's connections for I/O. See more in
the Polling section, and see also the poll() function
to poll on multiple processes.
Usage
process$poll_io(timeout)
Arguments
timeoutTimeout in milliseconds, for the wait or the I/O polling.
Method get_poll_connection()
$get_poll_connetion() returns the poll connection, if the process has
one.
Usage
process$get_poll_connection()
Method get_result()
$get_result() returns the result of the post processesing function.
It can only be called once the process has finished. If the process has
no post-processing function, then NULL is returned.
Usage
process$get_result()
Method as_ps_handle()
$as_ps_handle() returns a ps::ps_handle object, corresponding to
the process.
Usage
process$as_ps_handle()
Method get_name()
Calls ps::ps_name() to get the process name.
Usage
process$get_name()
Method get_exe()
Calls ps::ps_exe() to get the path of the executable.
Usage
process$get_exe()
Method get_cmdline()
Calls ps::ps_cmdline() to get the command line.
Usage
process$get_cmdline()
Method get_status()
Calls ps::ps_status() to get the process status.
Usage
process$get_status()
Method get_username()
calls ps::ps_username() to get the username.
Usage
process$get_username()
Method get_wd()
Calls ps::ps_cwd() to get the current working directory.
Usage
process$get_wd()
Method get_cpu_times()
Calls ps::ps_cpu_times() to get CPU usage data.
Usage
process$get_cpu_times()
Method get_memory_info()
Calls ps::ps_memory_info() to get memory data.
Usage
process$get_memory_info()
Method suspend()
Calls ps::ps_suspend() to suspend the process.
Usage
process$suspend()
Method resume()
Calls ps::ps_resume() to resume a suspended process.
Usage
process$resume()
Examples
p <- process$new("sleep", "2")
p$is_alive()
p
p$kill()
p$is_alive()
p <- process$new("sleep", "1")
p$is_alive()
Sys.sleep(2)
p$is_alive()
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