cell: cell imaging metrics dataset

In progenyClust: Finding the Optimal Cluster Number Using Progeny Clustering

Description

This cell dataset contains the first three principal components of the imaging metrics for 444 cells that were engineered into four patterns. The dataset therefore should include four clusters of cell samples in theory. See the references for more experimental and imaging analysis details of this data.

Usage

data("cell")

Format

A data frame with 444 observations on the following 3 variables.

PC1

The first principal component of imaging metrics

PC2

The second principal component of imaging metrics

PC3

The third principal component of imaging metrics

References

Slater, John, et al. "Recapitulation and Modulation of the Cellular Architecture of a User-Chosen Cell-of-Interest Using Cell-Derived, Biomimetic Patterning." ACS nano (2015).
Hu, C.W., et al. "Progeny Clustering: A Method to Identify Biological Phenotypes." Scientific reports 5 (2015).

Examples

data(cell)

progenyClust documentation built on May 2, 2019, 6:40 a.m.