| AICc | Akaike's second-order corrected Information Criterion |
| akaike.weights | Calculation of Akaike weights/relative likelihoods/delta-AICs |
| calib | Calculation of qPCR efficiency using dilution curves and... |
| Cy0 | Cy0 alternative to threshold cycles as in Guescini et al.... |
| eff | The amplification efficiency curve of a fitted object |
| efficiency | Calculation of qPCR efficiency and other important qPCR... |
| evidence | Evidence ratio for model comparisons with AIC, AICc or BIC |
| expcomp | Comparison of all sigmodal models within the exponential... |
| expfit | Calculation of PCR efficiency by fitting an exponential model |
| fitchisq | The chi-square goodness-of-fit |
| getPar | Batch calculation of qPCR fit... |
| is.outlier | Outlier summary for objects of class 'modlist' or 'replist' |
| KOD | (K)inetic (O)utlier (D)etection using several methods |
| llratio | Calculation of likelihood ratios for nested models |
| LOF.test | Formal lack-Of-Fit test of a nonlinear model against a... |
| LRE | Calculation of qPCR efficiency by the 'linear regression of... |
| maxRatio | The maxRatio method as in Shain et al. (2008) |
| meltcurve | Melting curve analysis with (iterative) Tm identification and... |
| midpoint | Calculation of the 'midpoint' region |
| modlist | Create nonlinear models from a dataframe and coerce them into... |
| mselect | Sigmoidal model selection by different criteria |
| parKOD | Parameters that can be changed to tweak the kinetic outlier... |
| pcrbatch | Batch calculation of qPCR efficiency and other qPCR... |
| pcrboot | Bootstrapping and jackknifing qPCR data |
| pcrfit | Workhorse function for qPCR model fitting |
| pcrGOF | Summarize measures for the goodness-of-fit |
| pcrimport | Advanced qPCR data import function |
| pcrimport2 | Simple qPCR data import function (i.e. from text files or... |
| pcropt1 | Combinatorial elimination of plateau and ground phase cycles |
| pcrsim | Simulation of sigmoidal qPCR data with goodness-of-fit... |
| plot.pcrfit | Plotting qPCR data with fitted curves |
| predict.pcrfit | Value prediction from a fitted qPCR model |
| PRESS | Allen's PRESS (Prediction Sum-Of-Squares) statistic, aka... |
| propagate | Error propagation using different methods |
| qpcR_datasets | The (published) datasets implemented in qpcR |
| qpcR_functions | The nonlinear/mechanistic models implemented in qpcR |
| qpcR.news | Display news and changes of qpcR package versions |
| ratiobatch | Calculation of ratios in a batch format for multiple... |
| ratiocalc | Calculation of ratios from qPCR runs with/without reference... |
| ratioPar | Calculation of ratios in a batch format from external PCR... |
| refmean | Averaging of multiple reference genes |
| replist | Amalgamation of single data models into a model containing... |
| resplot | An (overlayed) residuals barplot |
| resVar | Residual variance of a fitted model |
| RMSE | Root-mean-squared-error of a fitted model |
| Rsq | R-square value of a fitted model |
| Rsq.ad | Adjusted R-square value of a fitted model |
| RSS | Residual sum-of-squares of a fitted model |
| sliwin | Calculation of qPCR efficiency by the 'window-of-linearity'... |
| takeoff | Calculation of the qPCR takeoff point |
| update.pcrfit | Updating and refitting a qPCR model |
