multitrait: Example Cross object from R/QTL with multiple traits

Description Usage Format Details Source References Examples

Description

Cross object from R/QTL, an object of class cross from R/QTL. See read.cross for details.

Usage

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Format

Cross object from R/QTL

Details

Arabidopsis recombinant inbred lines by selfing. There are 162 lines, 24 phenotypes, and 117 markers on 5 chromosomes.

Source

Part of the Arabidopsis RIL selfing experiment with Landsberg erecta (Ler) and Cape Verde Islands (Cvi) with 162 individuals scored (with errors at) 117 markers. Dataset obtained from GBIC - Groningen BioInformatics Centre

References

. Plant J. 14(2), 259–271.

Examples

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data(multitrait)					# Load dataset
multitrait <- fill.geno(multitrait)                     # impute missing genotype data

result <- mqmscanall(multitrait, logtransform=TRUE)	# Analyse all 24 traits

Example output



qtl documentation built on June 20, 2017, 9:05 a.m.