table2map: Convert a table of marker positions to a map object.
In qtl: Tools for Analyzing QTL Experiments
table2map R Documentation
Convert a table of marker positions to a map object.
Description
Convert a data frame with marker positions to a map object.
Usage
table2map(tab)
Arguments
tab
A data frame with two columns: chromosome and position.
The row names are the marker names.
Value
A map object: a list whose components (corresponding
to chromosomes) are vectors of marker positions.
Author(s)
Karl W Broman, broman@wisc.edu
See Also
map2table, pull.map, est.map
Examples
tab <- data.frame(chr=c(1,1,1,1,2,2,2,2,3,3,3,3),
pos=c(0,2,4,8,0,2,4,8,0,2,4,8))
rownames(tab) <- paste0("marker", 1:nrow(tab))
map <- table2map(tab)
qtl documentation built on Sept. 11, 2024, 5:43 p.m.
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| table2map | R Documentation |
Convert a table of marker positions to a map object.
Description
Convert a data frame with marker positions to a map object.
Usage
table2map(tab)Arguments
tab |
A data frame with two columns: chromosome and position. The row names are the marker names. |
Value
A map object: a list whose components (corresponding
to chromosomes) are vectors of marker positions.
Author(s)
Karl W Broman, broman@wisc.edu
See Also
map2table, pull.map, est.map
Examples
tab <- data.frame(chr=c(1,1,1,1,2,2,2,2,3,3,3,3),
pos=c(0,2,4,8,0,2,4,8,0,2,4,8))
rownames(tab) <- paste0("marker", 1:nrow(tab))
map <- table2map(tab)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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