API for qtl2pleio
Testing Pleiotropy in Multiparental Populations
| Global functions | |
|---|---|
| %>% | Man page |
| add_pmap | Man page Source code |
| boot_pvl | Man page Source code |
| calc_Bhat | Man page Source code |
| calc_Sigma | Man page Source code |
| calc_covs | Man page Source code |
| calc_invsqrt_mat | Man page Source code |
| calc_lrt_tib | Man page Source code |
| calc_profile_lods | Man page Source code |
| calc_sqrt_mat | Man page Source code |
| check_identical | Man page Source code |
| check_missingness | Man page Source code |
| convert_to_scan1_output | Man page Source code |
| drop_depcols | Source code |
| expand_genoprobs_intcovar | Source code |
| find_lin_indep_cols | Source code |
| find_matching_cols | Source code |
| find_pleio_peak_tib | Man page Source code |
| fit1_pvl | Man page Source code |
| formX_intcovar | Source code |
| get_effects | Man page Source code |
| make_id2keep | Man page Source code |
| matrix_x_3darray | Source code |
| matrix_x_matrix | Source code |
| matrix_x_vector | Source code |
| plot_pvl | Man page Source code |
| prep_X_list | Man page Source code |
| prep_mytab | Man page Source code |
| process_inputs | Man page Source code |
| qtl2pleio | Man page |
| rcpp_calc_Bhat | Man page Source code |
| rcpp_calc_Bhat2 | Man page Source code |
| rcpp_gls | Source code |
| rcpp_log_dmvnorm2 | Man page Source code |
| rcpp_ols | Source code |
| rcppeigen_get_chol | Source code |
| rcppeigen_get_chol_diag | Source code |
| rcppeigen_get_chol_stable | Source code |
| rcppeigen_get_det | Source code |
| rcppeigen_get_diag | Source code |
| rcppeigen_invert_matrix | Source code |
| rcppeigen_invsqrt | Source code |
| rcppeigen_sqrt | Source code |
| scan_multi_onechr | Man page Source code |
| scan_multi_oneqtl | Man page Source code |
| scan_multi_oneqtl_perm | Man page Source code |
| scan_pvl | Man page Source code |
| scan_pvl_clean | Source code |
| sim1 | Man page Source code |
| subset_input | Man page Source code |
| subset_kinship | Man page Source code |
| timesTwo | Source code |
| weighted_3darray | Source code |
| weighted_matrix | Source code |
