Description Usage Arguments Value Examples
Calculate Vg and Ve from d-variate phenotype and kinship
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pheno |
n by d matrix of phenotypes |
kinship |
a kinship matrix, n by n |
X1pre |
n by c design matrix. c = 1 to ignore genotypes |
max_iter |
maximum number of EM iterations |
max_prec |
maximum precision for stepwise increments in EM algorithm |
covariates |
a n by n.cov matrix of numeric covariates |
a list with 2 named components, Vg and Ve. Each is a d by d covariance matrix.
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