write.parfile: write a LINKAGE parameter file

In rJPSGCS: R-Interface to Gene Drop Simulation from JPSGCS

Description

Use a snp.matrix object and genetic map to create a LINKAGE parameter file.

Usage

write.parfile(snp.data, map, file="out.par")

Arguments

snp.data	a snp.matrix object of genotypes
map	genetic map in centiMorgans
file	file name for the output parameter file

Value

None. The output is the parameter file.

Author(s)

Jinko Graham, Brad McNeney and Annick Nembot-Simo

See Also

write.pedfile

Examples

data(exdat)
sdat<-as(exdat$markers,"snp.matrix") #coerce to snp.matrix
write.parfile(sdat,exdat$map,file="test.par")
unlink("test.par")

rJPSGCS documentation built on May 1, 2019, 11:10 p.m.