draw.pbmodelled: plot the 210Pb data
In rbacon: Age-Depth Modelling using Bayesian Statistics

draw.pbmodelled

R Documentation

plot the 210Pb data

Description

Produce a plot of the 210Pb data and their depths

Usage

draw.pbmodelled(
  set = get("info"),
  BCAD = set$BCAD,
  rotate.axes = FALSE,
  rev.d = FALSE,
  rev.age = FALSE,
  pb.lim = c(),
  d.lim = c(),
  d.lab = c(),
  pb.lab = c(),
  pbmodelled.col = function(x) rgb(0, 0, 1, x),
  pbmeasured.col = "blue",
  supp.col = "purple",
  plot.measured = TRUE,
  age.lim = c(),
  mgp = mgp,
  pb.lty = 1,
  save.info = TRUE
)

Arguments

`set`	Detailed information of the current run, stored within this session's memory as variable `info`.
`BCAD`	The calendar scale of graphs is in `cal BP` by default, but can be changed to BC/AD using `BCAD=TRUE`.
`rotate.axes`	The default of plotting age on the horizontal axis and event probability on the vertical one can be changed with `rotate.axes=TRUE`.
`rev.d`	The direction of the depth axis can be reversed from the default (`rev.d=TRUE`).
`rev.age`	The direction of the calendar age axis can be reversed from the default (`rev.age=TRUE`)
`pb.lim`	Minimum and maximum of the 210Pb axis ranges, calculated automatically by default (`pb.lim=c()`).
`d.lim`	Minimum and maximum depths to plot; calculated automatically by default (`d.lim=c()`).
`d.lab`	The labels for the depth axis. Default `d.lab="Depth (cm)"`.
`pb.lab`	The label for the 210Pb axis (default `pb.lab="210Pb (Bq/kg)"` or `"210Pb (dpm/g)"`).
`pbmodelled.col`	Colour of the modelled 210Pb values. Defaults to scales of blue: `pbmodelled.col=function(x) rgb(0,0,1,x)`.
`pbmeasured.col`	Colour of the measured 210Pb values. Defaults to blue.
`supp.col`	Colour of the supported 210Pb data. Defaults to red: `supp.col="red"`.
`plot.measured`	Plot the measured 210Pb values (default `plot.measured=TRUE`).
`age.lim`	values of the age axis. Used to calculate where to plot the pb values on the secondary axis
`mgp`	Axis text margins (where should titles, labels and tick marks be plotted). Defaults to `mgp=c(1.7, .7, .0)`.
`pb.lty`	Line type of measured Pb-210 data.
`save.info`	By default, a variable called ‘info’ with relevant information about the run (e.g., core name, priors, settings, ages, output) is saved into the working directory. Note that this will overwrite any existing variable with the same name.