reGenotyper: Detecting Mislabeled Samples in Genetic Data

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Detecting mislabeled samples in genetic data.

Author
Yang Li <yang.li@rug.nl>
Date of publication
2015-05-05 16:14:49
Maintainer
Yang Li <yang.li@rug.nl>
License
GPL
Version
1.2.0

View on CRAN

Man pages

genotype
Example genotype data
optimalGT
Compute the best-fitted genotype data based on the phenotype
permutation
performing permutation for estimating the likelihood of a...
phenotype
Example phenotype data
reGenotyper
Detecting mislabeled samples, recovering the optimal...
reGenotyper-internal
Internal Functions
tMatFunction
computing t statistics for each phentoype at each marker
wlsObject
Example object of class wls

Files in this package

reGenotyper
reGenotyper/NAMESPACE
reGenotyper/data
reGenotyper/data/genotype.rda
reGenotyper/data/phenotype.rda
reGenotyper/data/wlsObject.rda
reGenotyper/R
reGenotyper/R/tMatFunction.R
reGenotyper/R/optimalGT.R
reGenotyper/R/helperFunctions.R
reGenotyper/R/permutation.R
reGenotyper/R/reGenotyper.R
reGenotyper/MD5
reGenotyper/DESCRIPTION
reGenotyper/man
reGenotyper/man/genotype.Rd
reGenotyper/man/wlsObject.Rd
reGenotyper/man/reGenotyper.Rd
reGenotyper/man/phenotype.Rd
reGenotyper/man/permutation.Rd
reGenotyper/man/tMatFunction.Rd
reGenotyper/man/optimalGT.Rd
reGenotyper/man/reGenotyper-internal.Rd