wgscan.cgu: Whole genome scan results for the CGU (Creole from Guadeloupe...
In rehh.data: Data Only: Searching for Footprints of Selection using Haplotype Homozygosity Based Tests
Description
A dataframe object with of 44,057 rows (SNPs) and 7 columns: i) chromosome name (CHR), ii) position of the SNP in bp (POSITION), iii) Ancestral allele frequency (freq_A), iv) iHH for the ancestral allele (iHH_A), v) iHH for the derived allele (iHH_D), vi) iES using the estimator by Tang et al. (2007) (iES_Tang_et_al_2007), vii) iES using the estimator by Sabeti et al. (2007) (iES_Sabeti_et_al_2007).
Usage
1
References
Gautier, M. and Naves, M. (2011). Footprints of selection in the ancestral admixture of a New World
Creole cattle breed. Molecular Ecology, 20, 3128–3143.
rehh.data documentation built on May 1, 2019, 9:13 p.m.
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Description
A dataframe object with of 44,057 rows (SNPs) and 7 columns: i) chromosome name (CHR), ii) position of the SNP in bp (POSITION), iii) Ancestral allele frequency (freq_A), iv) iHH for the ancestral allele (iHH_A), v) iHH for the derived allele (iHH_D), vi) iES using the estimator by Tang et al. (2007) (iES_Tang_et_al_2007), vii) iES using the estimator by Sabeti et al. (2007) (iES_Sabeti_et_al_2007).
Usage
1 |
References
Gautier, M. and Naves, M. (2011). Footprints of selection in the ancestral admixture of a New World Creole cattle breed. Molecular Ecology, 20, 3128–3143.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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