relMix: Relationship Inference for DNA Mixtures
Version 1.2.3

Makes relationship inference involving DNA mixtures with unknown profiles.

AuthorNavreet Kaur, Thore Egeland, Guro Dorum
Date of publication2017-04-03 15:31:14 UTC
MaintainerGuro Dorum <guro.dorum@gmail.com>
LicenseGPL (>= 2)
Version1.2.3
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("relMix")

Getting started

RelMix 1.2"

Popular man pages

allGenos: Find all possible genotypes
createDatamatrix: Create data matrix with possible genotype combinations for...
db: Allele database
db2: Allele database for 22 markers
generateMix: Create a mixture of genotypes with simulated drop-in and...
mixLikDrop: Likelihoods for DNA mixtures with dropout and dropin
relMixGUI: GUI for relMix
See all...

All man pages Function index File listing

Man pages

allGenos: Find all possible genotypes
allGenosRel: Finds all possible genotypes for specified individuals in a...
createDatamatrix: Create data matrix with possible genotype combinations for...
db: Allele database
db2: Allele database for 22 markers
generateMix: Create a mixture of genotypes with simulated drop-in and...
mixLikDrop: Likelihoods for DNA mixtures with dropout and dropin
relMix: Relationship inference based on mixtures.
relMixGUI: GUI for relMix

Functions

allGenos Man page Source code
allGenosRel Man page Source code
createDatamatrix Man page Source code
db Man page
db2 Man page
generateMix Man page Source code
mixLikDrop Man page Source code
prAllMix Source code
relMix Man page Source code
relMixGUI Man page Source code

Files

inst
inst/extdata
inst/extdata/mixture_silent_ex.txt
inst/extdata/custom_pedigree_unrelated_duo.R
inst/extdata/freqsSilent.txt
inst/extdata/references.txt
inst/extdata/frequencies22Markers.txt
inst/extdata/mixture.txt
inst/extdata/custom_pedigree_maternity_duo.R
inst/extdata/references_silent.txt
inst/doc
inst/doc/relMixVignette.html
inst/doc/relMixVignette.R
inst/doc/relMixVignette.Rmd
NAMESPACE
data
data/db2.RData
data/db.RData
R
R/relMixGUI.R
R/relMix.R
R/mixLikDrop.R
R/allGenosRel.R
R/globals.R
R/createDatamatrix.R
R/generateMix.R
R/allGenos.R
vignettes
vignettes/mixture_silent_ex.txt
vignettes/pedigrees_ex1.png
vignettes/database_options.png
vignettes/database_crop.png
vignettes/contributors_ex1.png
vignettes/database_options_ex2.png
vignettes/dropout_ex2.png
vignettes/results_ex2.png
vignettes/scaling_ex2.png
vignettes/contributors_ex2.png
vignettes/mutations_ex2.png
vignettes/freqsSilent.txt
vignettes/references.txt
vignettes/relMixVignette.Rmd
vignettes/relMix_screenshot.png
vignettes/frequencies22Markers.txt
vignettes/dropout_ex1.png
vignettes/mixture.txt
vignettes/custom_ped_ex2.png
vignettes/results_ex1.png
vignettes/references_silent.txt
MD5
build
build/vignette.rds
DESCRIPTION
man
man/relMixGUI.Rd
man/db2.Rd
man/db.Rd
man/allGenos.Rd
man/allGenosRel.Rd
man/relMix.Rd
man/createDatamatrix.Rd
man/generateMix.Rd
man/mixLikDrop.Rd
relMix documentation built on May 19, 2017, 5:37 p.m.

Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

Please suggest features or report bugs in the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.