binned_zmat: Three GWAS studies - input objects to main function

In repfdr: Replicability Analysis for Multiple Studies of High Dimension

Description

This data was created from the zmat matrix (see SNPlocations) using ztobins function. It contain two objects to be input to the main function repfdr.

Format

The file includes two objects - a matrix and 3d array:

bz is a matrix of binned 249024 z-scores (in rows) in each of the 3 studies (columns).

pbz is a 3-dimensional array which contains for each study (first dimension), the probabilities of a z-score to fall in the bin (second dimension), under each hypothesis status (third dimension).

Examples

## Not run: 
download.file('http://www.math.tau.ac.il/~ruheller/repfdr_RData/binned_zmat.RData',
  destfile = "binned_zmat.RData")
load(file = "binned_zmat.RData")

bz[1:5,]
pbz[,1:5,]

## End(Not run)

repfdr documentation built on May 1, 2019, 9:20 p.m.