Man pages for reproducible
A Set of Tools that Enhance Reproducibility Beyond Package Management

addChangedAttrAdd an attribute to an object indicating which named elements...
addTagsToOutputAdd tags to object
archiveExtractBinaryTests if unrar or 7zip exist
assessDataTypeAssess the appropriate raster layer data type
basename2A version of 'base::basename' that is 'NULL' resistant
CacheCache method that accommodates environments, S4 methods,...
CacheDigestThe exact digest function that 'Cache' uses
cache-helpersA set of helpers for Cache
CacheHelpersA collection of low level tools for Cache
cacheMessageCreate a custom cache message by class
cache-toolsCreate a new cache
checkAndMakeCloudFolderIDCheck for presence of 'checkFolderID' (for 'Cache(useCloud)')
checkCacheRepoCheck for cache repository info in ...
checkForAuxiliaryFilesCheck a neededFile for commonly needed auxiliary files
checkGDALVersionCheck whether the system has a minimum version of GDAL...
checkGitConfigCheck global git config file
checkoutVersionClone, fetch, and checkout from repositories
ChecksumsCalculate checksum
clearStubArtifactsClear erroneous archivist artifacts
cloudCheckOldBasic tool for using cloud-based caching
cloudDownloadDownload from cloud, if necessary
cloudSyncCacheOldSync cloud with local Cache
cloudUploadUpload to cloud, if necessary
cloudUploadFromCacheUpload a file to cloud directly from local 'cacheRepo'
cloudWriteOldBasic tool for using cloud-based caching
compareNA'NA'-aware comparison of two vectors
convertPathsChange the absolute path of a file
CopyRecursive copying of nested environments, and other "hard to...
copyFileCopy a file using 'robocopy' on Windows and 'rsync' on...
cropInputsCrop a 'Spatial*' or 'Raster*' object
debugCacheAttach debug info to return for Cache
determineFilenameDetermine filename, either automatically or manually
digestCalculate the hashes of multiple files
dlGenericDownload file from generic source url
dlGoogleDownload file from Google Drive
dot-formalsNotInCurrentDotsIdentify which formals to a function are not in the current...
dot-removeCacheAttsRemove attributes that are highly varying
dot-requireNamespaceProvide standard messaging for missing package dependencies
downloadFileA wrapper around a set of downloading functions
extractFromArchiveExtract files from archive
fastMaskFaster operations on rasters
file.moveMove a file to a new location
FilenamesReturn the filename(s) from a 'Raster*' object
fixErrorsDo some minor error fixing
getGDALVersionCheck the GDAL version in use
grepSysCallsGrep system calls
guessAtTargetTry to pick a file to load
isInteractiveAlternative to 'interactive()' for unit testing
isWindowsTest whether system is Windows
linkOrCopyHardlink, symlink, or copy a file
listFilesInArchiveList files in either a '.zip' or or '.tar' file
makeMemoisableGeneric method to make or unmake objects memoisable
maskInputsMask module inputs
mergeCacheMerge two cache repositories together
messageDFUse message to print a clean square data structure
movedCacheDeal with moved cache issues
objSizeRecursive 'object.size'
Path-classCoerce a character string to a class "Path"
pipeA cache-aware pipe that does not mask with '%>%'
pkgEnvThe 'reproducible' package environment
postProcessGeneric function to post process objects
postProcessHelpersHierarchically get crs from 'Raster*', 'Spatial*'
preDigestByClassAny miscellaneous things to do before '.robustDigest' and...
prefixAdd a prefix or suffix to the basename part of a file path
prepareFileBackedRasterCopy the file-backing of a file-backed Raster* object
prepareOutputMake any modifications to object recovered from cacheRepo
prepInputsDownload and optionally post-process files
preProcessDownload, Checksum, Extract files
projectInputsProject 'Raster*' or Spatial* or 'sf' objects
purgePurge individual line items from checksums file
reexportsObjects exported from other packages
reproducibleOptions'reproducible' options
reproducible-packageThe 'reproducible' package
retryA wrapper around 'try' that retries on failure
robustDigestCreate reproducible digests of objects in R
searchSearch up the full scope for functions
setSubAttrInListSet subattributes within a list by reference
sortDotsUnderscoreFirstSort or order any named object with dotted names and...
spatialClasses-classThe 'spatialClasses' class
studyAreaNameGet a unique name for a given study area
tagsByClassAdd extra tags to an archive based on class
testForArchiveExtractReturns unrar path and creates a shortcut as .unrarPath Was...
unrarPathThe known path for unrar or 7z
viewCacheExamining and modifying the cache
writeFutureWrite to cache repository, using 'future::future'
writeOutputsWrite module inputs on disk
reproducible documentation built on Aug. 3, 2020, 5:16 p.m.