API for reproducible
Enhance Reproducibility of R Code

Global functions
.absPathOrNA Source code
.addChangedAttr Man page
.addChangedAttr,ANY-method Man page
.addSlashNToAllButFinalElement Source code
.addTagsRepo Man page Source code
.addTagsRepoAccessedTime Source code
.addTagsToOutput Man page
.addTagsToOutput,ANY-method Man page
.applyUrlRemap Man page Source code
.archiveExtractBinary Man page Source code
.bucketDirList Source code
.cacheMessage Man page
.cacheMessage,ANY-method Man page
.cacheMessageObjectSize Source code
.cacheMessageObjectToRetrieve Man page Source code
.cacheNumDefaultTags Source code
.cacheTableHashColName Source code
.cacheTableTagColName Source code
.callArchiveExtractFn Source code
.checkCacheRepo Man page
.checkCacheRepo,ANY-method Man page
.checkDeprecated Source code
.checkForSimilar Source code
.checkFunInDots Source code
.checkLocalSources Source code
.checkSumsUpdate Source code
.classifyRemoteHashAlgo Source code
.closeCacheUrlFrame Source code
.cloudNamePrefixQuery Source code
.compareChecksumsAndFilesAddDirs Source code
.createCache Source code
.debugCache Man page Source code
.decodeMagicNumber Source code
.deprecMsgOnce Source code
.digest Man page
.digest,character-method Man page
.digestRasterLayer Source code
.digestVersion Source code
.dirListingUrls Source code
.dlGooglePublic Man page Source code
.dlHttr2Stream Source code
.dlRejectionProbeFile Source code
.doDigest Source code
.downloadCloudDBFile Source code
.downloadErrorFn Source code
.driveDirRemap Source code
.dumpPreDigest Man page Source code
.expandAlsoExtractPatterns Man page Source code
.extractDriveId Source code
.extractFunction Source code
.file.move Man page Source code
.fileExtsKnown Source code
.findCallByName Source code
.findRemoteHashSidecars Source code
.fixNoFileExtension Source code
.fnCleanup Source code
.forkLimit Source code
.formalsNotInCurrentDots Man page Source code
.formatDuration Man page Source code
.gadmPath Source code
.gdriveAuthCandidates Source code
.gdriveBrowserUrl Source code
.gdriveHasToken Source code
.gdrivePrepareAuth Source code
.gdriveProbe Source code
.getColors Source code
.getDataPath Source code
.getDataPathRecursive Source code
.getDestinationPathShared Source code
.getDestinationPathSharedRecursive Source code
.get_fresh_gd_bearer Source code
.googleDriveId Source code
.grepSysCalls Man page Source code
.guessAtFile Source code
.guessAtTargetAndFun Man page Source code
.guessFileExtension Source code
.humanBytes Source code
.ignoreTagKeys Source code
.installAsyncShownCache Source code
.isArchive Source code
.isCRSany Man page Source code
.isGridded Man page Source code
.isMemoised Man page Source code
.isRstudioServer Source code
.isSF Man page Source code
.isSpat Man page Source code
.isSpatRaster Source code
.isSpatVector Source code
.isSpatialAny Man page Source code
.isVector Man page Source code
.listFilesInArchive Man page Source code
.listableParent Source code
.logUrlAccess Source code
.looksLikeGoogleInterstitial Source code
.maybeAnnounceUrlLog Source code
.maybeRecordUrlForCache Source code
.maybeSpawnShowCacheAsync Source code
.message Man page
.messageFunctionFn Man page Source code
.namesPostProcessFormals Source code
.objSizeWithTry Man page Source code
.onAttach Source code
.onLoad Source code
.onUnload Source code
.openCacheUrlFrame Source code
.orderDotsUnderscoreFirst Man page Source code
.parallelCores Source code
.parallelDownload Source code
.parallelMaxConnections Source code
.parallelOptInt Source code
.parallelRangedDownload Man page Source code
.parallelUpload Source code
.parseGoogleConfirm Source code
.parseRemoteHashFile Source code
.persistUrlTags Source code
.pkgEnv Man page
.pp_make_ctx Source code
.preDigestByClass Man page
.preDigestByClass,ANY-method Man page
.prefix Man page Source code
.prepareFileBackedRaster Man page Source code
.prepareOutput Man page
.prepareOutput,ANY-method Man page
.probeRange Man page Source code
.purge Man page Source code
.readUrlLines Source code
.readline Source code
.remapUrlEarly Man page Source code
.remoteDirProbe Source code
.remoteSiblings Source code
.removeCacheAtts Man page Source code
.reproducibleTempCacheDir Source code
.reproducibleTempInputDir Source code
.reproducibleTempPath Source code
.requireNamespace Man page Source code
.resolveDlFunCaptured Source code
.retryFailedSerially Source code
.robustDigest Man page
.robustDigest,ANY-method Man page
.robustDigest,Path-method Man page
.robustDigest,call-method Man page
.robustDigest,character-method Man page
.robustDigest,data.frame-method Man page
.robustDigest,environment-method Man page
.robustDigest,expression-method Man page
.robustDigest,function-method Man page
.robustDigest,integer-method Man page
.robustDigest,language-method Man page
.robustDigest,list-method Man page
.robustDigest,matrix-method Man page
.robustDigest,numeric-method Man page
.robustDigestFormatOnly Source code
.scalarOrNA Source code
.setSubAttrInList Man page Source code
.similarFilesInCheckSums Source code
.similarTo Source code
.sortDotsUnderscoreFirst Man page Source code
.stopGoogleDriveAccess Source code
.suffix Man page Source code
.systemArchivePath Man page
.tagsByClass Man page
.tagsByClass,ANY-method Man page
.takeCacheUrlFrame Source code
.testForArchiveExtract Man page Source code
.tryExtractFromArchive Source code
.txtDownloadFailedFn Source code
.unlistToCharacter Source code
.unwrap Man page Source code
.unwrap.PackedSpatExtent2 Man page Source code
.unwrap.PackedSpatVector Man page Source code
.unwrap.PackedSpatVector2 Man page Source code
.unwrap.data.table Man page Source code
.unwrap.default Man page Source code
.unwrap.environment Man page Source code
.unwrap.list Man page Source code
.updateTagsRepo Man page Source code
.upsertChecksumsRow Source code
.urlHeadOK Source code
.urlInfoFromMatchedCall Source code
.urlLogKey Source code
.urlLogOff Source code
.urlLogRecord Source code
.urlRemapFn Man page Source code
.useParallelDownload Man page Source code
.whereInStack Man page Source code
.whichExtractFn Source code
.wrap Man page Source code
.wrap.default Man page Source code
.wrap.environment Man page Source code
.wrap.list Man page Source code
.writeSessionRecord Source code
BecauseOfLossOfColumn Source code
Cache Man page Source code
CacheDBFile Man page Source code
CacheDBFileCheckAndCreate Source code
CacheDBFileSingle Source code
CacheDBFileSingleExt Source code
CacheDBFiles Source code
CacheDBTableName Man page Source code
CacheDigest Man page Source code
CacheGeo Man page Source code
CacheIsACache Man page Source code
CacheRequiresFUNtxt Source code
CacheSize Source code
CacheStorageDir Man page Source code
CacheStoredFile Man page Source code
CacheTimings Source code
CacheV2 Man page Source code
Checksums Man page
Checksums,character,logical-method Man page
Checksums,character,missing-method Man page
Copy Man page
Copy,ANY-method Man page
Copy,data.frame-method Man page
Copy,data.table-method Man page
Copy,list-method Man page
Copy,refClass-method Man page
ExportedMethods Man page
FileLinkUsed Source code
Filenames Man page
Filenames,ANY-method Man page
Filenames,Path-method Man page
Filenames,data.table-method Man page
Filenames,environment-method Man page
Filenames,list-method Man page
IndentRevert Source code
IndentUpdate Source code
LoadedCache Source code
LoadedCacheResult Source code
ObjToRetrieveFn Source code
Path-class Man page
RequireNamespaceFn Source code
SSL_REVOKE_BEST_EFFORT Source code
Saved Source code
SavingToCacheTxt Source code
absoluteBase Source code
addCacheAttr Source code
addDotArgs Source code
addDotArgsInner Source code
allowMultipleFNs Source code
appendChecksumsTable Source code
appendChecksumsTableWithCS Source code
appendFunctionNameToNestedTags Source code
archiveExtractBinary Man page
as.call2 Source code
asPath Man page Source code
asPath.NULL Man page Source code
asPath.character Man page Source code
assessDataType Man page Source code
assessDataType.default Man page Source code
assessDataTypeOuter Source code
assessGoogle Source code
attributesReassign Source code
basename2 Man page Source code
basenames3 Source code
best_square_grid Source code
boundaryPolygon Source code
browserCond Source code
bufferIncremental Source code
build_lambert_proj4 Source code
cache2 Man page
cacheChainingPost Source code
cacheChainingSetup Source code
cacheChainingStep Source code
cacheId Man page Source code
cacheIdCheckInCache Source code
cacheIdNotAssessed Source code
cacheIdNotSameTxt Source code
cacheIdOverride Source code
cache_Id_Identical Source code
callIsQuote Source code
captureWarningsToAttr Source code
cc Man page Source code
changingFormat Source code
checkAndMakeCloudFolderID Man page Source code
checkConns Source code
checkHaveCorrectHashedVersion Source code
checkNameHasGeom Source code
checkOverlappingArgs Source code
checkPath Man page
checkPath,NULL,ANY-method Man page
checkPath,character,logical-method Man page
checkPath,character,missing-method Man page
checkPath,missing,ANY-method Man page
checkRelative Man page Source code
checkSFWebPage Source code
checkSameCacheId Source code
check_and_get_cached_copy Source code
check_and_get_memoised_copy Source code
checksumsDirsOk Source code
clearCache Man page
clearCache,ANY-method Man page
clearCacheOverwrite Source code
clearUrlLog Man page Source code
cliCol Source code
cloudDownload Man page Source code
cloudDownloadRasterBackend Source code
cloudFolderFromCacheRepo Source code
cloudRead Source code
cloudReadOnly Source code
cloudUploadFromCache Man page Source code
cloudUploadRasterBackends Source code
cloudWrite Source code
cloudWriteOrRead Source code
coerce,character,Path-method Man page
collect_showCache_async Source code
combine_clean_args Source code
compareNA Man page Source code
connIsForCachePath Source code
convertCallToCommonFormat Man page Source code
convertCallWithSquigglyBraces Source code
convertDBbackendIfIncorrect Source code
convertPaths Man page Source code
convertRasterPaths Man page Source code
convertToSFwMessage Source code
copyFile Man page
copyFromDPtoReproducibleIPs Source code
copySingleFile Man page Source code
createCache Man page Source code
createConns Source code
createSimilar Source code
cropInputs Man page Source code
cropInputs.default Man page Source code
cropSF Source code
cropTo Man page Source code
crsFromGoogleDriveTile Source code
crsFromLocalFile Source code
crsFromLocalOrGDTiles Source code
crsFromLocalTile Source code
currentFilesToChecksumsTable Source code
dataType2 Man page Source code
dbConnectAll Source code
dbDisconnectAll Source code
dealWithArchive Source code
dealWithCacheRecoveryErrors Source code
defunct Source code Source code
detectActiveCores Man page Source code
determineFilename Man page Source code
digestSpatVector Source code
dlErrorHandling Source code
dlGeneric Man page Source code
dlGoogle Man page Source code
doDigest Source code
doDigestPrepare Source code
doSaveToCache Source code
dotObjectsToNULL Source code
downloadFile Man page Source code
downloadMakeAndUploadTiles Source code
downloadRemote Man page Source code
download_resumable_httr2 Source code
driveLs Source code
escapeRegexChars Source code
evalTheFun Source code
evalTheFunAndAddChanged Source code
evaluate_args Source code
extntNA Source code
extractFileNOTtoChecksum Source code
extractFromArchive Man page Source code
extractFromCache Man page Source code
extractPolygonIfWithin Source code
extract_drive_id Source code
fileExt Source code
filePathSansExt Source code
filenameInCacheWPrefix Source code
filenamesFromArchiveLst Source code
filter_objects Source code
fixErrors Man page Source code
fixErrors.default Man page Source code
fixErrorsIn Man page Source code
forkChildFailed Source code
forkChildFailedHard Source code
formals2 Source code
formals3 Source code
formatCheck Source code
gadmFallback Source code
gdalMask Man page Source code
gdalProject Man page Source code
gdalResample Man page Source code
getCacheRepos Source code
getDataFn Source code
getDrv Source code
getEnv Source code
getFunctionName2 Source code
getHashFromDB Source code
getMethodAll Source code
getPreviousEntryInCache Source code
getRelative Man page Source code
getRemoteFileSize Source code
getRemoteMetadata Source code
getTargetCRS Source code
getTargetFilePath Source code
getTeamDrive Source code
getTilesFromGoogleDrive Source code
get_function_defaults Source code
googledriveIDtoDownloadURL Source code
googledriveIDtoHumanURL Source code
guessAlsoExtract Source code
guessAtTarget Man page
hardLinkOrCopy Source code
harmonizeCall Man page Source code
identical2 Source code
identifyCHECKSUMStxtFile Source code
internetExists Man page Source code
is.naSpatial Source code
is.nulls Source code
isAbsolutePath Source code
isCI Source code
isCRSSF Source code
isCRSTerra Source code
isCRScharacter Source code
isDevMode Source code
isDirectory Source code
isDollarOnlySqBr Source code
isDollarSqBrPkgColon Source code
isFile Source code
isGeomType Source code
isGoogleDownloadURL Source code
isGoogleDriveDirectory Source code
isGoogleDriveDirectoryFromTibble Source code
isGoogleDriveURL Source code
isGoogleID Source code
isID Source code
isInteractive Man page Source code
isLinux Man page Source code
isMac Source code
isNULLorNA Source code
isOrHasRaster Source code
isPkgColon Source code
isPkgColonFn Source code
isPolygons Source code
isRaster Source code
isSpat2 Source code
isSpatial Man page Source code
isSquigglyCall Source code
isTRUEorForce Source code
isUnix Man page Source code
isUpdated Man page Source code
isWindows Man page Source code
keepCache Man page
keepCache,ANY-method Man page
keepOrigGeom Man page Source code
keyInGdriveLs Source code
linkOrCopy Man page Source code
linkOrCopyUpdateOnly Source code
list2envAttempts Source code
listGoogleDriveFolder Man page Source code
listNamed Man page Source code
loadFile Man page Source code
loadFromCache Man page Source code
loadFromCacheSwitchFormat Source code
loadFromDiskOrMemoise Source code
lockFile Source code
lsExistingTilesOnGoogleDrive Source code
makeAbsolute Source code
makeAndPlotTileGrid Source code
makeMemoisable Man page Source code
makeMemoisable.data.table Man page Source code
makeMemoisable.default Man page Source code
makePaddedNamesForTiles Source code
makeRelative Man page Source code
makeRemoteHashFile Source code
makeTileGrid Source code
makeTileGridFromGADMcode Source code
makeTileNames Source code
makeUrlRemap Man page Source code
makeVal Source code
maskInputs Man page Source code
maskInputs.default Man page Source code
maskTo Man page Source code
matchCall Source code
matchCall2 Man page Source code
match_call_primitive Source code
maxFn Man page Source code
memoiseEnv Source code
mergeCache Man page
mergeCache,ANY-method Man page
mergeShownCacheCloud Man page Source code
messConvert Source code
messageAboutFilesize Source code
messageAboutFilesizeCompare Source code
messageCache Man page Source code
messageColoured Man page Source code
messageDF Man page Source code
messageDeclareError Source code
messagePreProcess Man page Source code
messagePrepInputs Man page Source code
messageQuestion Man page Source code
messageStripColor Source code
metadataDT Source code
metadata_define_postEval Source code
metadata_define_preEval Source code
metadata_update Source code
methodFormals Source code
milliseconds Source code
minFn Man page Source code
minmaxFn Source code
missingFiles Source code
missingUnrar Source code
modifyListPaths Source code
moveAttributes Source code
movedCache Man page Source code
nextNumericName Source code
nlayers2 Man page Source code
noSimilarCacheTxt Source code
normPath Man page
normPath,NULL-method Man page
normPath,character-method Man page
normPath,list-method Man page
normPath,logical-method Man page
normPath,missing-method Man page
normPathRel Man page Source code
nullOr Source code
numCoresToUse Man page Source code
objSize Man page Source code
objSize.Path Source code
objSize.default Source code
objSize.environment Source code
objSize.function Source code
objSize.list Source code
objSizeSession Man page Source code
on.exit2 Source code
onlyStorageFiles Source code
optionsSetForCache Source code
overwriting Source code
paddDFInitial Source code
paddedFloatToChar Man page Source code
parseTags Source code
plotGridAndArea Source code
postProcess Man page Source code
postProcess.default Man page Source code
postProcess.list Man page Source code
postProcessInputsSuperseded Man page
postProcessTerra Man page
postProcessTo Man page Source code
postProcessToAssertions Source code
pp_check_local_sources Source code
pp_checksums_init Source code
pp_download Source code
pp_extract Source code
pp_finalize Source code
pp_link_to_destination Source code
pp_purge Source code
pp_remote_hash_check Source code
pp_resolve_files Source code
pp_resolve_needed_files Source code
preProcess Man page Source code
preProcessParams Man page Source code
prefixCacheId Source code
prepInputs Man page Source code
prepInputsAssertions Source code
prepInputsCOG Man page Source code
prepInputsLog Man page Source code
prepInputsWithTiles Man page Source code
prepopulateCacheAsync Man page Source code
process Source code
projectInputs Man page Source code
projectInputs.default Man page Source code
projectTo Man page Source code
purgeChecksums Man page Source code
purgeGoogleTiles Source code
purgeLocalTiles Source code
purgeLocals Source code
rastTiles Source code
rasterRead Man page Source code
rasterType Source code
readCheckSumFilePath Source code
rebuildColors Source code
recursiveEvalNamesOnly Source code
relativeToWhat Source code
releaseLockFile Source code
remapFilenames Man page Source code
remapOldArgs Source code
removeDirs Source code
reorder_arguments Source code
reorder_by_first_element Source code
reportTime Source code
reproducible Man page
reproducible-package Man page
reproducibleOptions Man page Source code
retry Man page Source code
revertClass Source code
rmDotObjects Source code
rmFromCache Man page Source code
rmFromCloudFolder Source code
rmRastIfTryError Source code
rndstr Source code
roundTo6Dec Source code
runChecksums Source code
runDlFun Source code
sampRand Source code
saveDBFileSingle Source code
saveFilesInCacheFolder Source code
saveToCache Man page Source code
searchFull Man page Source code
searchFullEx Man page Source code
searchInRepos Source code
set.randomseed Man page Source code
setMinMaxIfNeeded Source code
setupArchive Source code
setupCacheNesting Source code
sevenZipNoRar Source code
showCache Man page
showCache,ANY-method Man page
showCacheCloud Man page Source code
showCacheFast Source code
showSimilar Source code
skipCache Source code
spawn_showCache_async Source code
sprcMosaicRast Source code
stopFunNotResolved Source code
stopNeedArchive Source code
stopRcppError Source code
strsplitOnlySingleColon Source code
studyAreaName Man page
studyAreaName,ANY-method Man page
studyAreaName,character-method Man page
suffix Man page
suffixLockFile Source code
suffixMultipleDBFiles Source code
suppressWarningsSpecific Source code
swapCacheFileFormat Source code
switchDataTypes Source code
sysTimeForCacheToChar Source code
tagsSpatRaster Source code
tempdir2 Man page Source code
tempfile2 Man page Source code
testForArchiveExtract Man page
tile_raster_write_auto Source code
try2 Source code
tryCatch2 Source code
tryRastThenGetCRS Source code
undoDoCall Source code
unmakeMemoisable Man page Source code
unmakeMemoisable.default Man page Source code
unrarPath Man page
unwrapRaster Source code
unwrapSpatRaster Source code
unwrapSpatVector Source code
updateArchiveWithGuess Source code
updateFilenameSlots Man page Source code
updateFilenameSlots.default Man page Source code
updateFilenameSlots.environment Man page Source code
updateFilenameSlots.list Man page Source code
update_bbox Source code
upload_tiles_to_drive_url_parallel Source code
urlExists Man page Source code
useCacheChaining Source code
useCacheFromNested Source code
useCacheIsFALSE Source code
useDBI Source code
userTagsListToDT Source code
usesPointer Man page Source code
usesPointer.default Source code
usesPointer.environment Source code
usesPointer.list Source code
validateUseCloud Source code
values2 Man page Source code
vectorType Source code
verboseAppendOrCreateDF Source code
verboseCacheDFAll Source code
verboseCacheMessage Source code
verboseDF0 Source code
verboseDF1 Source code
verboseDF2 Source code
verboseDF3 Source code
withoutFinalNumeric Source code
wrapSaveToCache Source code
wrapSpatRaster Source code
wrapSpatVector Source code
writeChecksumsTable Source code
writeFuture Man page Source code
writeOutputs Man page Source code
writeOutputs.default Man page Source code
writeTo Man page Source code
reproducible documentation built on Aug. 26, 2026, 1:07 a.m.