Description Fields Methods Extends See Also Examples
The reference classes eutil, einfo,
esearch, esummary,
efetch, elink, epost,
egquery, espell, and
ecitmatch implement the request generator for interaction
with the NCBI services.
They should not be used direcly, but initialized through the respective
constructor functions einfo, esearch,
esummary, efetch, elink,
epost, egquery, espell, and
ecitmatch.
paramsA named list of query parameters.
errorsA eutil_error object.
contentResult of an Entrez request stored as a character vector.
get_content(as = "text", ...)Return the results of an Entrez query as text, xml, json, a textConnection,
or parsed to a list or data.frame; should not be used directly, use
content instead.
get_error()Return eutil_errors; should not be used directly,
use getError instead.
get_url()Return the URL used for an Entrez query; should not be used directly,
use getUrl instead.
perform_query(method = "GET", ...)Perform an Entrez query using either http GET or POST requests; should not be used directly.
xmlAttr(xpath, name, as = "character", default = NA_character_)Extract the value of XML attributes given a valid XPath expression and an attribute name
xmlName(xpath, as = "character", default = NA_character_)Extract the tag names of XML nodes given a valid XPath expression.
xmlSet(xpath, ...)Extract a set of XML nodes given a valid XPath expression.
xmlValue(xpath, as = "character", default = NA_character_)Extract the text value of XML leaf nodes given a valid XPath expression.
All reference classes extend and inherit methods from
"envRefClass". Furthermore, "einfo",
"esearch", "esummary", "efetch", "elink",
"epost", "egquery", "espell", and "ecitmatch"
all extend the "eutil" class.
eutil, einfo,
esearch, esummary, efetch,
elink, epost, egquery,
espell, and ecitmatch.
1 | showClass("eutil")
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.