calc_change_in_ml: calc_change_in_ml
In rhierbaps: Clustering Genetic Sequence Data Using the HierBAPS Algorithm
View source: R/calc_change_in_ml.R
calc_change_in_ml R Documentation
calc_change_in_ml
Description
Calculate the change in the log marginal likelihood after moving index to each possible cluster
Usage
calc_change_in_ml(snp.object, partition, indexes)
Arguments
snp.object
A snp.object containing the processed SNP data.
partition
An integer vector indicating a partition of the isolates.
indexes
Indexes of the isolates to be moved (must come from one cluster.)
Value
the best cluster to move indexes to.
rhierbaps documentation built on Nov. 18, 2022, 5:06 p.m.
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View source: R/calc_change_in_ml.R
| calc_change_in_ml | R Documentation |
calc_change_in_ml
Description
Calculate the change in the log marginal likelihood after moving index to each possible cluster
Usage
calc_change_in_ml(snp.object, partition, indexes)
Arguments
snp.object |
A snp.object containing the processed SNP data. |
partition |
An integer vector indicating a partition of the isolates. |
indexes |
Indexes of the isolates to be moved (must come from one cluster.) |
Value
the best cluster to move indexes to.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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