rjags: Bayesian Graphical Models using MCMC
Version 4-6

Interface to the JAGS MCMC library.

AuthorMartyn Plummer [aut, cre], Alexey Stukalov [ctb], Matt Denwood [ctb]
Date of publication2016-02-19 23:59:59
MaintainerMartyn Plummer <plummerm@iarc.fr>
LicenseGPL (== 2)
Version4-6
URL http://mcmc-jags.sourceforge.net
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("rjags")

Getting started

Package overview

Popular man pages

adapt: Adaptive phase for JAGS models
diffdic: Differences in penalized deviance
jags.module: Dynamically load JAGS modules
jags.samples: Generate posterior samples
line: Linear regression example
read.jagsdata: Read data files for jags models
rjags-package: Bayesian graphical models using MCMC
See all...

All man pages Function index File listing

Man pages

adapt: Adaptive phase for JAGS models
coda.samples: Generate posterior samples in mcmc.list format
control: Advanced control over JAGS
dic.samples: Generate penalized deviance samples
diffdic: Differences in penalized deviance
jags.model: Create a JAGS model object
jags.module: Dynamically load JAGS modules
jags.object: Functions for manipulating jags model objects
jags.samples: Generate posterior samples
line: Linear regression example
mcarray.object: Objects for representing MCMC output
parallel: Get initial values for parallel RNGs
read.jagsdata: Read data files for jags models
rjags-deprecated: Deprecated Functions in the rjags package
rjags-package: Bayesian graphical models using MCMC
update: Update jags models

Functions

LINE Man page
adapt Man page Source code
as.mcmc.list.mcarray Man page Source code
check.jags.home Source code
coda.names Source code
coda.samples Man page Source code
coef.jags Man page Source code
dic Man page
dic.samples Man page
diffdic Man page
findJAGS Source code
isDLLLoaded Source code
jags.model Man page Source code
jags.samples Man page Source code
list.factories Man page Source code
list.modules Man page Source code
list.samplers Man page Source code
load.module Man page Source code
make.coda.names Source code
mcarray.object Man page
nchain Source code
noJAGS Source code
onAttach Source code
onLoad Source code
onUnload Source code
parallel.seeds Man page Source code
parse.varname Source code
parse.varnames Source code
print.jags Source code
print.mcarray Man page Source code
print.summary.mcarray Source code
quiet.messages Source code
read.bugsdata Man page Source code
read.data Man page Source code
read.jagsdata Man page Source code
rjags Man page
rjags-deprecated Man page
rjags-package Man page
set.factory Man page Source code
setPB Source code Source code
summary.mcarray Man page Source code
unload.module Man page Source code
update.jags Man page Source code
updatePB Source code Source code
variable.names.jags Man page Source code

Files

configure.ac
src
src/jags.cc
src/parallel.cc
src/Makevars.in
src/Makevars.win
NAMESPACE
INSTALL
data
data/LINE.RData
R
R/mcarray.R
R/jags.R
R/jags.object.R
R/dic.R
R/windows
R/windows/progress.bar.R
R/windows/zzz.R
R/unix
R/unix/zzz.R.in
R/unix/progress.bar.R
R/read.data.R
MD5
DESCRIPTION
configure
man
man/dic.samples.Rd
man/coda.samples.Rd
man/read.jagsdata.Rd
man/adapt.Rd
man/rjags-package.Rd
man/update.Rd
man/parallel.Rd
man/mcarray.object.Rd
man/jags.object.Rd
man/diffdic.Rd
man/line.Rd
man/jags.module.Rd
man/control.Rd
man/rjags-deprecated.Rd
man/jags.model.Rd
man/jags.samples.Rd
configure.win
cleanup
rjags documentation built on May 19, 2017, 5:03 p.m.