forest.robu: Forest Plots for Robust Variance Estimation Meta-Analysis

Description Usage Arguments References Examples

View source: R/forest.robu.R

Description

forest.robu In meta-analysis, forest plots provide a graphical depiction of effect size estimates and their corresponding confidence intervals. The forest.robu() function in robumeta can be used to produce forest plots for RVE meta-analyses. The function requires the grid package and is based on examples provided in (Murrell, 2011). As is the case with traditional forest plots, point estimates of individual effect sizes are plotted as boxes with areas proportional to the weight assigned to that effect size. Importantly, here the weight is not necessarily proportional to the effect size variance or confidence intervals, since the combined study weight is divided evenly across the study effect sizes. Two-sided 95% confidence intervals are calculated for each effect size using a standard normal distribution and plotted along with each block. The overall effect is included at the bottom of the plot as a diamond with width equivalent to the confidence interval for the estimated effect. The RVE forest function is designed to provide users with forest plots which display each individual effect size used in the meta-analysis, while taking into account the study- or cluster-level properties inherent to the RVE analysis. As such, the user must specify columns from their original dataset that contain labels for the study or cluster and for the individual effect sizes.

Usage

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forest.robu(x, es.lab, study.lab, ...)

Arguments

x

An intercept-only RVE model previously fit using the robu() function..

es.lab

A vector of labels to be used to individual effect sizes in the forest plot. Labels for individual effect sizes might be “Math Score” or “Reading Score” for a meta-analysis that included such measures or as simple as “Effect Size 1” and “Effect Size 2.”

study.lab

A vector of labels to be used to identify study (or cluster) level groupings in the forest plot. For instance, labels for the study column might be author names with corresponding publication years.

...

Additional arguments to be passed to the forest function. Any number of additional columns can be specified to be plotted along side the confidence interval column and can be specified with the following syntax ``arg1'' = ``arg2'' where ``arg1'' is the title of the column on the forest plot, and ``arg2'' is the name of the column from the original data.frame that contains the information to be displayed alongside the estimates and confidence intervals.

References

Hedges, L.V., Tipton, E., Johnson, M.C. (2010) Robust variance estimation in meta-regression with dependent effect size estimates. Research Synthesis Methods. 1(1): 39–65. Erratum in 1(2): 164–165. DOI: 10.1002/jrsm.5

Murrell P (2011). R Graphics. CRC/Taylor & Francis. ISBN 9781439831762.

Tipton, E. (in press) Small sample adjustments for robust variance estimation with meta-regression. Psychological Methods.

Examples

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# Load data
data(oswald2013.ex1)

# Run intercept only model.
oswald_intercept <- robu(formula = effect.size ~ 1, data = oswald2013.ex1, 
                         studynum = Study, var.eff.size = var.eff.size, 
                         rho = 0.8, small = TRUE)

# Create forest plot. 
forest.robu(oswald_intercept, es.lab = "Crit.Cat", study.lab = "Study", 
            "Effect Size" = effect.size, # optional column
            "Weight" = r.weights)        # optional column

robumeta documentation built on May 1, 2019, 8:21 p.m.