get_tomic_table: Get Tomic Table

In romic: R for High-Dimensional Omic Data

Get Tomic Table

Description

Extract one of the specific tables from a tomic object

Usage

get_tomic_table(tomic, table_type)

Arguments

tomic

Either a tidy_omic or triple_omic object

table_type

The type of table to extract from the tomic object. tidy one row per measurements with feature and sample attributes added. Equivalent to the $data field of a tidy omic object measurements one row per measurements defined a feature and sample foreign key. Equivalent to the $measurements field of a triple omic object features one row per feature defined by a feature primary key. Equivalent to the $features field of a triple omic object samples one row per sample defined by a sample primary key. Equivalent to the $samples field of a triple omic object

Value

a tibble matching the table_type of the tomic object

Examples

get_tomic_table(brauer_2008_triple, "samples")
get_tomic_table(brauer_2008_tidy, "features")

romic documentation built on Sept. 21, 2023, 9:06 a.m.