rpcdsearch: Tools for the Construction of Clinical Code Lists for Primary Care Database Studies

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Allows users to identify relevant clinical codes and automate the construction of clinical code lists for primary care database studies. This package is analogous to the Stata command pcdsearch.

Author
David Springate [aut, cre], Evangelos Kontopantelis [ctb], Ivan Olier [ctb]
Date of publication
2016-01-18 10:05:38
Maintainer
David Springate <daspringate@gmail.com>
License
GPL (>= 2)
Version
1.0

View on CRAN

Man pages

definition_search
This function is used to build new definition lists based on...
export_definition_search
Exports definition searches to an excel file
get_EHR_attribute
Return the value of an attribute in the .ehr environment
import_definitions
Imports definitions to be searched from a csv file into a...
list_EHR_attributes
Lists all of the EHR attribute names in .ehr
MedicalDefinition
Constructor function for MedicalDefinition class
print.MedicalDefinition
Basic print method for medical definition classes
rpcdsearch
The rpcdsearch package.
set_CPRD
Sets EHR metadata to CPRD format When this is run, most...
set_EHR_attribute
Sets the value of an attribute in the .ehr environment

Files in this package

rpcdsearch
rpcdsearch/inst
rpcdsearch/inst/extdata
rpcdsearch/inst/extdata/example_search.csv
rpcdsearch/inst/extdata/SMI_search.csv
rpcdsearch/inst/doc
rpcdsearch/inst/doc/codelists.Rmd
rpcdsearch/inst/doc/codelists.R
rpcdsearch/inst/doc/codelists.html
rpcdsearch/tests
rpcdsearch/tests/testthat.R
rpcdsearch/tests/testthat
rpcdsearch/tests/testthat/test_import.R
rpcdsearch/NAMESPACE
rpcdsearch/R
rpcdsearch/R/rpcdsearch.R
rpcdsearch/R/pcdsearch.R
rpcdsearch/R/ehr_system.R
rpcdsearch/R/zzz.R
rpcdsearch/vignettes
rpcdsearch/vignettes/codelists.Rmd
rpcdsearch/README.md
rpcdsearch/MD5
rpcdsearch/build
rpcdsearch/build/vignette.rds
rpcdsearch/DESCRIPTION
rpcdsearch/man
rpcdsearch/man/set_CPRD.Rd
rpcdsearch/man/list_EHR_attributes.Rd
rpcdsearch/man/MedicalDefinition.Rd
rpcdsearch/man/print.MedicalDefinition.Rd
rpcdsearch/man/definition_search.Rd
rpcdsearch/man/export_definition_search.Rd
rpcdsearch/man/get_EHR_attribute.Rd
rpcdsearch/man/set_EHR_attribute.Rd
rpcdsearch/man/import_definitions.Rd
rpcdsearch/man/rpcdsearch.Rd