summary.pheno: Methods for pheno and derived objects

In rsBayes: Bayesian Models for Remotely Sensed Data

Description

Methods for extracting information from fitted model of class pheno and predict.pheno objects from predict.

Usage

## S3 method for class 'pheno'
summary(object, sub.sample, quantiles = c(0.025, 0.25,
0.5, 0.75, 0.975), digits = max(3L, getOption("digits") - 3L), ...)
## S3 method for class 'pheno'
plot(x, ...)
## S3 method for class 'pheno'
fitted(object, sub.sample, ...)
## S3 method for class 'pheno'
residuals(object, sub.sample, ...)
## S3 method for class 'pheno'
print(x, ...)
## S3 method for class 'predict.pheno'
print(x, ...)

Arguments

object, x	object of class pheno or predict.pheno.
sub.sample	an optional list that specifies the samples to included in the summary or composition sampling. Valid tags are start, end, and thin. Given the value associated with the tags, the sample subset is selected using seq(as.integer(start), as.integer(end), by=as.integer(thin)). The default values are start=floor(0.5*n.samples), end=n.samples and thin=1.
quantiles	for summary, posterior distribution quantiles to compute.
digits	for summary, number of digits to report in summary.
...	currently not used.

Details

A set of standard extractor functions for fitted model objects of class pheno and prediction object of class predict.pheno, including methods to the generic functions print and summary.

Author(s)

Andrew O. Finley [e-mail], Chad Babcock [e-mail]

rsBayes documentation built on Sept. 14, 2020, 5:06 p.m.