API for rtms
R Toolkit for Mass Spectrometry
| Global functions | |
|---|---|
| [.rtmsSampleSet | Man page |
| [[.rtmsSampleSet | Man page |
| [[<-.rtmsSampleSet | Man page |
| `[.rtmsSampleSet` | Source code |
| `[[.rtmsSampleSet` | Source code |
| `[[<-.rtmsSampleSet` | Source code |
| baf_goToOffset | Source code |
| baf_readFileHeader | Source code |
| baf_readHeaderRow | Source code |
| baf_recode | Source code |
| baf_reshiftOffset | Source code |
| bafidx_getRawVectors | Source code |
| bin_checkBytes | Source code |
| bin_readVarInt | Source code |
| checkPeakSetsEqual | Source code |
| checkPeaksEqual | Source code |
| close.rtmsBrukerMCFReader | Man page Source code |
| closeBrukerMCFReader | Man page Source code |
| emptySampleSet | Man page Source code |
| emptySubsample | Source code |
| exampleSpectrum | Man page |
| getBrukerBAFAllMetadata | Man page Source code |
| getBrukerBAFMetadata | Man page Source code |
| getBrukerBAFSample | Man page Source code |
| getBrukerBAFSpectrum | Man page Source code |
| getBrukerMCFAllMetadata | Man page Source code |
| getBrukerMCFIndices | Man page Source code |
| getBrukerMCFIntensities | Man page Source code |
| getBrukerMCFMetadata | Man page Source code |
| getBrukerMCFSample | Man page Source code |
| getBrukerMCFSampleSet | Man page Source code |
| getBrukerMCFSpectrum | Man page Source code |
| getBrukerMCFSpots | Man page Source code |
| getRtmsMeasures | Source code |
| getSample | Man page Source code |
| getSample.default | Source code |
| getSample.rtmsBrukerBAFReader | Man page Source code |
| getSample.rtmsBrukerMCFReader | Man page Source code |
| getSample.rtmsSpectrum | Man page Source code |
| getSampleFromSpectrum | Man page Source code |
| getSampleSet | Man page Source code |
| getSampleSet.default | Source code |
| getSampleSet.rtmsBrukerMCFReader | Man page Source code |
| getSpectrum | Man page Source code |
| getSpectrum.default | Source code |
| getSpectrum.rtmsBrukerBAFReader | Man page Source code |
| getSpectrum.rtmsBrukerMCFReader | Man page Source code |
| getSubsampleFromSpectrum | Source code |
| localMean | Source code |
| mcf_blobSeek | Source code |
| mcf_checkBlobCodeWord | Source code |
| mcf_readKeyValueRow | Source code |
| mcf_readKeyValueTable | Source code |
| mcf_readNamedKeyValueRow | Source code |
| mcf_readNamedName | Source code |
| mcf_readNamedTableRow | Source code |
| mcf_readNamedTableRowBlank | Source code |
| mcf_readNumericPrimitiveBlank | Source code |
| mcf_readPrimitive | Source code |
| mcf_readPrimitiveArray | Source code |
| mcf_readTable | Source code |
| mcf_readTableRow | Source code |
| measureSample | Man page Source code |
| measureSampleSet | Man page Source code |
| newBrukerBAFReader | Man page Source code |
| newBrukerMCFReader | Man page Source code |
| new_rtmsBrukerBAFReader | Source code |
| new_rtmsBrukerMCFReader | Source code |
| new_rtmsPeak | Source code |
| new_rtmsSample | Source code |
| new_rtmsSampleSet | Source code |
| new_rtmsSpectrum | Source code |
| new_rtmsSpectrumPiece | Source code |
| new_rtmsSubsample | Source code |
| plotRtmsSample | Man page Source code |
| plotRtmsSampleSet | Man page Source code |
| plotRtmsSpectrum | Man page Source code |
| readBafExtraFile | Source code |
| readBafIndexFile | Source code |
| readBrukerMCFIndexFile | Source code |
| readMCFCalibration | Source code |
| reopen | Man page Source code |
| reopen.default | Source code |
| reopen.rtmsBrukerMCFReader | Man page Source code |
| reopenBrukerMCFReader | Man page Source code |
| rep.rtmsSample | Man page Source code |
| rep.rtmsSampleSet | Man page Source code |
| retrieveMCFMetadata | Source code |
| rtmsMeasure_NumPeaks | Source code |
| rtmsMeasure_PeakArea | Source code |
| rtmsMeasure_PeakIntensity | Source code |
| rtmsPeak | Man page Source code |
| rtmsPeakList | Man page Source code |
| rtmsSpectrum | Man page Source code |
| rtmsSpectrumPiece | Source code |
| rtms_pickQifftPeaks | Source code |
| sampleAndSampleSet | Man page |
| shrinkBounds | Source code |
| sqlt_getPage | Source code |
| sqlt_parseBTreeInteriorPage | Source code |
| sqlt_parseBTreeLeafPage | Source code |
| sqlt_parseBTreeTable | Source code |
| sqlt_parseRecord | Source code |
| sqlt_parseRecordValue | Source code |
| validate_rtmsSample | Source code |
| validate_rtmsSpectrum | Source code |
| validate_rtmsSpectrumPiece | Source code |
| wholenumber | Source code |
