getBrukerMCFSample: Extract a sample from a Bruker MCF directory

In rtms: R Toolkit for Mass Spectrometry

Extract a sample from a Bruker MCF directory

Description

Extracts an RTMS sample object (of class rtmsSample) from a multi- acquisition Bruker MCF directory opened using an RTMS reader object (of class rtmsBrukerMCFReader). A numeric index is used to identify which acquisition the sample should be extracted from.

Usage

## S3 method for class 'rtmsBrukerMCFReader'
getSample(x, peaks, ...)

getBrukerMCFSample(reader, peaks, index)

Arguments

x	The MCF reader object
peaks	A list of peak objects of class rtmsPeak
...	Additional parameters
reader	An RTMS reader object of class rtmsBrukerMCFReader
index	A single numeric index specifying which acquisition the sample set should be extracted from

Value

An RTMS sample object of class rtmsSample

Functions

• getSample(rtmsBrukerMCFReader): The S3 method getSample for objects of class rtmsBrukerMCFReader; calls getBrukerMCFSample

rtms documentation built on June 7, 2023, 5:59 p.m.