ruv: Detect and Remove Unwanted Variation using Negative Controls
Version 0.9.7

Implements the 'RUV' (Remove Unwanted Variation) algorithms. These algorithms attempt to adjust for systematic errors of unknown origin in high-dimensional data. The algorithms were originally developed for use with genomic data, especially microarray data, but may be useful with other types of high-dimensional data as well. These algorithms were proposed by Gagnon-Bartsch and Speed (2012), and by Gagnon-Bartsch, Jacob and Speed (2013). The algorithms require the user to specify a set of negative control variables, as described in the references. The algorithms included in this package are 'RUV-2', 'RUV-4', 'RUV-inv', 'RUV-rinv', 'RUV-I', and RUV-III', along with various supporting algorithms.

Package details

AuthorJohann Gagnon-Bartsch <[email protected]>
Date of publication2018-03-12 19:19:17 UTC
MaintainerJohann Gagnon-Bartsch <[email protected]>
LicenseGPL
Version0.9.7
URL http://www-personal.umich.edu/~johanngb/ruv/
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("ruv")

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ruv documentation built on March 18, 2018, 1:16 p.m.