ruv_varianceplot: RUV Variance Plot
In ruv: Detect and Remove Unwanted Variation using Negative Controls
ruv_varianceplot R Documentation
RUV Variance Plot
Description
A scatter plot of (squared) coefficient estimates against variance estimates.
Usage
ruv_varianceplot(fit, X.col = 1, power = 1/4)
Arguments
fit
The results of a call to ruv_summary.
X.col
Which column of the X matrix to make the plot for. Can be either an integer or a character string.
power
Power transformation of the x and y axes. Default is fourth root.
Details
A black curve is also plotted, showing the estimated variances of the coefficient estimates.
Value
A ggplot.
Author(s)
Johann Gagnon-Bartsch
ruv documentation built on Sept. 1, 2026, 5:09 p.m.
R Package Documentation
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| ruv_varianceplot | R Documentation |
RUV Variance Plot
Description
A scatter plot of (squared) coefficient estimates against variance estimates.
Usage
ruv_varianceplot(fit, X.col = 1, power = 1/4)
Arguments
fit |
The results of a call to |
X.col |
Which column of the X matrix to make the plot for. Can be either an integer or a character string. |
power |
Power transformation of the x and y axes. Default is fourth root. |
Details
A black curve is also plotted, showing the estimated variances of the coefficient estimates.
Value
A ggplot.
Author(s)
Johann Gagnon-Bartsch
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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