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saasCNV: Somatic Copy Number Alteration Analysis Using Sequencing and SNP Array Data
Perform joint segmentation on two signal dimensions derived from total read depth (intensity) and allele specific read depth (intensity) for whole genome sequencing (WGS), whole exome sequencing (WES) and SNP array data.
Getting started
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Package details |
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| Author | Zhongyang Zhang [aut, cre], Ke Hao [aut], Nancy R. Zhang [ctb] |
| Maintainer | Zhongyang Zhang <zhongyang.zhang@mssm.edu> |
| License | GPL (>= 2) |
| Version | 0.3.4 |
| URL | https://zhangz05.u.hpc.mssm.edu/saasCNV/ |
| Package repository | View on CRAN |
| Installation |
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