API for saasCNV
Somatic Copy Number Alteration Analysis Using Sequencing and SNP Array Data

Global functions
BAF2mBAF Man page Source code
ComputeZ.fromS.R Man page
ComputeZ.fromS.R.partial Man page
GC.adjust Man page Source code
Mode Man page Source code
NGS.CNV Man page
SNP.CNV Man page
`ComputeZ.fromS.R.partial` Source code
`ComputeZ.fromS.R` Source code
`compute.var` Source code
`computeBeta` Source code
`computeMoments` Source code
`computeTiltDirect` Source code
`computeZ.onechange.sample` Source code
`computeZ.onechange` Source code
`computeZ.squarewave.sample` Source code
`dchi` Source code
`fcompute.max.Z` Source code
`fmscbs` Source code
`fscan.max` Source code
`getCutoffMultisampleWeightedChisq` Source code
`matrix.max` Source code
`mscbs.classify` Source code
`pmarg.sumweightedchisq` Source code
`pvalueMultisampleWeightedChisq` Source code
`vu` Source code
check.overlap Man page Source code
cnv.call Man page Source code
cnv.data Man page Source code
cnv.data.chr Man page Source code
compute.baseline Man page Source code
compute.baseline.manual Man page Source code
compute.var Man page
computeBeta Man page
computeMoments Man page
computeTiltDirect Man page
computeZ.onechange Man page
computeZ.onechange.sample Man page
computeZ.squarewave.sample Man page
dchi Man page
delta.sd Man page Source code
diagnosis.QQ.plot Man page Source code
diagnosis.cluster.plot Man page Source code
diagnosis.seg.plot.chr Man page Source code
fcompute.max.Z Man page
fmscbs Man page
fscan.max Man page
genome.wide.plot Man page Source code
getCutoffMultisampleWeightedChisq Man page
impute.missing.data Man page Source code
joint.segmentation Man page Source code
matrix.max Man page
merging.segments Man page Source code
merging.segments.chr Man page Source code
mscbs.classify Man page
pmarg.sumweightedchisq Man page
pvalueMultisampleWeightedChisq Man page
reannotate.CNV.res Man page Source code
saasCNV Man page
saasCNV-package Man page
seg.summary Man page
seq.cnv Man page
seq.data Man page
seq.segs Man page
seq.segs.merge Man page
snp.cnv Man page
snp.cnv.anno Man page
snp.cnv.data Man page Source code
snp.cnv.refine Man page
snp.cnv.refine.anno Man page
snp.data Man page
snp.refine.boundary Man page Source code
snp.segs Man page
snp.segs.merge Man page
snp_table Man page
vcf2txt Man page Source code
vcf_table Man page
vu Man page
saasCNV documentation built on May 1, 2019, 7:49 p.m.