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# function to compute an orthogonal complement of X, used in computing
# the constrained likelihood
orth_c <- function(X, tol=.1e-7) {
nr <- nrow(X)
nc <- ncol(X)
XE <- cbind(X, diag(nr))
use.c <- rep(TRUE, times=nr+nc)
for (i in 1:(nr+nc)) {
w<- sum(XE[,i]^2)
if (w < tol) use.c[i] <- FALSE else
{XE[,i] <- XE[,i]/sqrt(w)
if (i < nr+nc) {
for (j in (i+1):(nr+nc)) {
XE[,j] <- XE[,j] - sum(XE[,i]*XE[,j]) *
XE[,i]
}
}
}
}
cols <- (nc+1):(nc+nr)
cols <- cols[use.c[cols]==TRUE]
XE <- XE[,cols]
return(XE)
}
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