Man pages for santaR
Short Asynchronous Time-Series Analysis
| acuteInflammation | Measurement of 22 inflammatory mediators across time |
| AICc_smooth_spline | Calculate the Akaike Information Criterion Corrected for... |
| AIC_smooth_spline | Calculate the Akaike Information Criterion for a... |
| BIC_smooth_spline | Calculate the Bayesian Information Criterion for a... |
| get_eigen_DF | Compute the optimal df and weighted-df using 5 spline fitting... |
| get_eigen_DFoverlay_list | Plot for each eigenSpline the automatically fitted spline,... |
| get_eigen_spline | Compute eigenSplines across a dataset |
| get_eigen_spline_matrix | Generate a Ind x Time + Var data.frame concatenating all... |
| get_grouping | Generate a matrix of group membership for all individuals |
| get_ind_time_matrix | Generate a Ind x Time DataFrame from input data |
| get_param_evolution | Compute the value of different fitting metrics over all... |
| loglik_smooth_spline | Calculate the penalised loglikelihood of a smooth.spline |
| plot_nbTP_histogram | Plot an histogram of the number of time-trajectories with a... |
| plot_param_evolution | Plot the evolution of different fitting parameters across all... |
| santaR | santaR: A package for Short AsyNchronous Time-series Analysis... |
| santaR_auto_fit | Automate all steps of santaR fitting, Confidence bands... |
| santaR_auto_summary | Summarise, report and save the results of a santaR analysis |
| santaR_CBand | Compute Group Mean Curve Confidence Bands |
| santaR_fit | Generate a SANTAObj for a variable |
| santaR_plot | Plot a SANTAObj |
| santaR_pvalue_dist | Evaluate difference in group trajectories based on the... |
| santaR_pvalue_dist_within | Evaluate difference between a group mean curve and a constant... |
| santaR_pvalue_fit | Evaluate difference in group trajectories based on the... |
| santaR_pvalue_fit_within | Evaluate difference between a group mean curve and a constant... |
| santaR_start_GUI | santaR Graphical User Interface |
| scaling_mean | Mean scaling of each column |
| scaling_UV | Unit-Variance scaling of each column |
