Description Usage Arguments Examples
Plot 2D profile likelihood estimations.
1 2 | plot_sampled_2d_ple(df, parameter1, parameter2, fileout, title = "",
logspace = TRUE, scientific_notation = TRUE)
|
df |
the data set containing the parameter estimates to plot. |
parameter1 |
the name of the first parameter |
parameter2 |
the name of the second parameter |
fileout |
the output file |
title |
the plot title (default: "") |
logspace |
true if the parameters should be plotted in logspace (default: TRUE) |
scientific_notation |
true if the axis labels should be plotted in scientific notation (default: TRUE) |
1 2 3 4 5 6 7 8 9 | dir.create(file.path("pe_plots"))
data(insulin_receptor_all_fits)
colnames(insulin_receptor_all_fits)[1] <- "ObjVal"
insulin_receptor_all_fits[,2:4] <- log10(insulin_receptor_all_fits[,2:4])
fileout <- file.path("pe_plots", "2d_ple_k1_k2.pdf")
plot_sampled_2d_ple(df=insulin_receptor_all_fits,
parameter1="k1",
parameter2="k2",
fileout=fileout)
|
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