sbpiper_ps2: Main R function for SBpipe pipeline: parameter_scan2().

In sbpiper: Data Analysis Functions for 'SBpipe' Package

Description

Main R function for SBpipe pipeline: parameter_scan2().

Usage

sbpiper_ps2(model, scanned_par1, scanned_par2, inputdir, outputdir, run)

Arguments

model	the model name
scanned_par1	the 1st scanned parameter
scanned_par2	the 2nd scanned parameter
inputdir	the input directory
outputdir	the output directory
run	the simulation run

Examples

data(insulin_receptor_ps2_tp2)
dir.create(file.path("ps2_datasets"))
write.table(insulin_receptor_ps2_tp2, 
            file=file.path("ps2_datasets", 
                           "insulin_receptor_InsulinPercent__IRbetaPercent__rep_1__tp_2.csv"), 
            row.names=FALSE)
sbpiper_ps2(model="insulin_receptor_InsulinPercent__IRbetaPercent", 
           scanned_par1="InsulinPercent", 
           scanned_par2="IRbetaPercent", 
           inputdir="ps2_datasets", 
           outputdir="ps2_plots", 
           run=1)

sbpiper documentation built on May 2, 2019, 8:53 a.m.