scDECO: Estimating Dynamic Correlation

Implementations for two different Bayesian models of differential co-expression. scdeco.cop() fits the bivariate Gaussian copula model from Zichen Ma, Shannon W. Davis, Yen-Yi Ho (2023) <doi:10.1111/biom.13701>, while scdeco.pg() fits the bivariate Poisson-Gamma model from Zhen Yang, Yen-Yi Ho (2022) <doi:10.1111/biom.13457>.

Package details

AuthorAnderson Bussing [aut, cre], Yen-Yi Ho [aut, ths], Zichen Ma [aut], Zhen Yang [aut]
MaintainerAnderson Bussing <abussing@email.sc.edu>
LicenseGPL (>= 3)
Version0.1.1
URL https://github.com/YenYiHo-Lab/scDECO
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("scDECO")

Try the scDECO package in your browser

Any scripts or data that you put into this service are public.

scDECO documentation built on April 12, 2025, 2:11 a.m.