API for scMappR
Single Cell Mapper
| Global functions | |
|---|---|
| DeconRNAseq_CRAN | Man page |
| PBMC_example | Man page |
| POA_example | Man page |
| cellmarker_enrich | Man page Source code |
| coEnrich | Man page Source code |
| compare_deconvolution_methods | Man page Source code |
| cwFoldChange_evaluate | Man page Source code |
| deconvolute_and_contextualize | Man page Source code |
| extract_genes_cell | Man page Source code |
| gProfiler_cellWeighted_Foldchange | Man page Source code |
| generes_to_heatmap | Man page Source code |
| get_gene_symbol | Man page Source code |
| get_signature_matrices | Man page Source code |
| gmt | Man page |
| gsva_cellIdentify | Man page Source code |
| heatmap_generation | Man page Source code |
| human_mouse_ct_marker_enrich | Man page Source code |
| make_TF_barplot | Man page Source code |
| pathway_enrich_internal | Man page Source code |
| plotBP | Man page Source code |
| process_dgTMatrix_lists | Man page Source code |
| process_from_count | Man page Source code |
| scMappR_and_pathway_analysis | Man page Source code |
| scMappR_tissues | Man page |
| seurat_to_generes | Man page Source code |
| single_gene_preferences | Man page Source code |
| sm | Man page |
| tissue_by_celltype_enrichment | Man page Source code |
| tissue_scMappR_custom | Man page Source code |
| tissue_scMappR_internal | Man page Source code |
| toNum | Man page Source code |
| tochr | Man page Source code |
| topgenes_extract | Man page Source code |
| two_method_pathway_enrichment | Man page Source code |
