gmt: gmt_example

In scMappR: Single Cell Mapper

gmt_example

Description

Markers of 5 glial cell-types

Usage

data(gmt)

Format

A list with 5 character vectors, each containing genes.

Astrocytes_panglao

astrocyte markers identified by panglao

Schwann_panglao

Schwann markers identified by panglao

Bergmann glia_panglao

Bergmann glia markers identified by panglao

Kupffer_panglao

Kupffer markers identified by panglao

Oligodendrocyte progenitor_panglao

Oligodendrocyte progenitor markers identified by panglao

Details

A named list containing the cell-type markers of 5 glial cell types. Used for testing cell-type naming functions.

Examples

data(gmt)

scMappR documentation built on July 9, 2023, 6:26 p.m.