API for scalpel
Processes Calcium Imaging Data
| Global functions | |
|---|---|
| UIinputNumeric | Source code |
| UIinputOptions | Source code |
| UIinputYesNo | Source code |
| calcDissimilarity | Source code |
| checkWidthHeight | Source code |
| clusterComponents | Source code |
| clusterComponentsHelper | Source code |
| findSets | Source code |
| fitEst | Source code |
| getFrames | Source code |
| getNeuronStatus | Man page Source code |
| getScalpel | Man page Source code |
| getScalpelStep0 | Man page Source code |
| getScalpelStep1 | Man page Source code |
| getScalpelStep2 | Man page Source code |
| getScalpelStep3 | Man page Source code |
| getSpatialComponents | Source code |
| getStep1Version | Source code |
| getStep3Lambda | Source code |
| getY | Man page Source code |
| imageFastSmooth | Source code |
| imageFastSmoothHelper | Source code |
| plotBrightest | Man page |
| plotCandidateFrame | Man page |
| plotCluster | Man page |
| plotFrame | Man page |
| plotResults | Man page Source code |
| plotResultsAllLambda | Man page Source code |
| plotSpatial | Man page Source code |
| plotTemporal | Man page Source code |
| plotThresholdedFrame | Man page |
| plotVideoVariance | Man page |
| positivePart | Source code |
| reviewNeurons | Man page Source code |
| reviewNeuronsInteractive | Man page Source code |
| reviewNeuronsMoreFrames | Man page Source code |
| reviewOverlappingNeurons | Man page Source code |
| samplePixels | Source code |
| scalpel | Man page Source code |
| scalpel-package | Man page |
| scalpelStep0 | Man page Source code |
| scalpelStep1 | Man page Source code |
| scalpelStep2 | Man page Source code |
| scalpelStep3 | Man page Source code |
| sgl | Source code |
| sglConnected | Source code |
| sglHelper | Source code |
| sglMaxLambda | Source code |
| sglMaxLambdaVec | Source code |
| sglSingle | Source code |
| softScaleEst | Source code |
| stopQuietly | Source code |
| summary | Man page |
| summary.scalpel | Man page Source code |
| summary.scalpelStep0 | Man page Source code |
| summary.scalpelStep1 | Man page Source code |
| summary.scalpelStep2 | Man page Source code |
| summary.scalpelStep3 | Man page Source code |
| updateNeurons | Man page Source code |
| updateNeuronsInteractive | Man page Source code |
| updateThreshold | Man page Source code |
