jsDist: Jensen–Shannon distance metric (i.e. the square root of the...

In sccore: Core Utilities for Single-Cell RNA-Seq

Jensen–Shannon distance metric (i.e. the square root of the Jensen–Shannon divergence) between the columns of a dense matrix m

Description

Jensen–Shannon distance metric (i.e. the square root of the Jensen–Shannon divergence) between the columns of a dense matrix m

Usage

jsDist(m)

Arguments

m	Input matrix

Value

Vectorized version of the lower triangle as an R distance object, stats::dist()

Examples

ex = matrix(1:9, nrow = 3, ncol = 3)
jsDist(ex)

sccore documentation built on April 14, 2025, 1:08 a.m.