API for scrime
Analysis of High-Dimensional Categorical Data Such as SNP Data
| Global functions | |
|---|---|
| `canberra2Mats` | Source code |
| `checkATCG` | Source code |
| `checkCatMat` | Source code |
| `checkDistMat` | Source code |
| `checkDist` | Source code |
| `checkMatSNP` | Source code |
| `checkTableList` | Source code |
| `checkX1X2` | Source code |
| `chisqClass2` | Source code |
| `chisqInd` | Source code |
| `cohen2Mats` | Source code |
| `cohen` | Source code |
| `compChisqPval` | Source code |
| `compVarLevs` | Source code |
| `computeContCells` | Source code |
| `computeContClass` | Source code |
| `constructMatCheck` | Source code |
| `constructMatIA` | Source code |
| `dist2Mats` | Source code |
| `euclidean2Mats` | Source code |
| `evalRedundancy` | Source code |
| `fblr.weight` | Source code |
| `getBinDomRec` | Source code |
| `getBinGenotype` | Source code |
| `getCall` | Source code |
| `getDistance` | Source code |
| `getListIdentity` | Source code |
| `gknn` | Source code |
| `ia.samp` | Source code |
| `knncatimputeLarge` | Source code |
| `knncatimpute` | Source code |
| `manhattan2Mats` | Source code |
| `maximum2Mats` | Source code |
| `mc2Mats` | Source code |
| `minkowski2Mats` | Source code |
| `minrc2Mats` | Source code |
| `minrc` | Source code |
| `modeDist` | Source code |
| `pamCat` | Source code |
| `pcc2Mats` | Source code |
| `pcc` | Source code |
| `predict.pamCat` | Source code |
| `predictFBLR` | Source code |
| `print.pamCat` | Source code |
| `print.simSNPglm` | Source code |
| `print.simulatedSNPs` | Source code |
| `recodeAffySNP` | Source code |
| `recodeCount` | Source code |
| `recodeFirst` | Source code |
| `recodeNoHete` | Source code |
| `recodeSNPs` | Source code |
| `removeRedundancy` | Source code |
| `replaceNAs` | Source code |
| `row2col` | Source code |
| `rowCATTs` | Source code |
| `rowChisq2Class` | Source code |
| `rowChisqMultiClass` | Source code |
| `rowChisqStats` | Source code |
| `rowCors` | Source code |
| `rowFreqs` | Source code |
| `rowMsquares` | Source code |
| `rowScales` | Source code |
| `rowTables` | Source code |
| `rowTrendStats` | Source code |
| `sample.snpmat` | Source code |
| `simulateSNPglm` | Source code |
| `simulateSNPs` | Source code |
| `smc2Mats` | Source code |
| `smc` | Source code |
| `snp2bin` | Source code |
| `summary.simSNPglm` | Source code |
| `weightMode` | Source code |
| abf | Man page Source code |
| analyse.models | Man page |
| buildSNPannotation | Man page Source code |
| buildSNPmat | Man page Source code |
| canberra2Mats | Man page |
| check4Monomorphism | Man page Source code |
| checkATCG | Man page |
| checkCatMat | Man page |
| checkDist | Man page |
| checkDistMat | Man page |
| checkMatSNP | Man page |
| checkX1X2 | Man page |
| chisqClass2 | Man page |
| chisqInd | Man page |
| cohen | Man page |
| cohen2Mats | Man page |
| colEpistatic | Man page Source code |
| compChisqPval | Man page |
| compVarLevs | Man page |
| computeContCells | Man page |
| computeContClass | Man page |
| constructMatCheck | Man page |
| constructMatIA | Man page |
| dist2Mats | Man page |
| euclidean2Mats | Man page |
| evalRedundancy | Man page |
| fblr | Man page |
| fblr.weight | Man page |
| getBinDomRec | Man page |
| getBinGenotype | Man page |
| getCall | Man page |
| getDistance | Man page |
| getListIdentity | Man page |
| getMatFuzzy | Man page Source code |
| getResponseCat1 | Source code |
| getResponseRef | Source code |
| gknn | Man page |
| ia.samp | Man page |
| identifyMonomorphism | Man page Source code |
| knncatimpute | Man page |
| knncatimputeLarge | Man page |
| manhattan2Mats | Man page |
| maximum2Mats | Man page |
| mc2Mats | Man page |
| minkowski2Mats | Man page |
| minrc | Man page |
| minrc2Mats | Man page |
| modeDist | Man page |
| pamCat | Man page |
| pcc | Man page |
| pcc2Mats | Man page |
| predict.pamCat | Man page |
| predictFBLR | Man page |
| print.colEpi | Man page Source code |
| print.pamCat | Man page |
| print.simSNPcatResponse | Man page Source code |
| print.simSNPglm | Man page |
| print.simulatedSNPs | Man page |
| recodeAffySNP | Man page |
| recodeCount | Man page |
| recodeFirst | Man page |
| recodeNoHete | Man page |
| recodeSNPs | Man page |
| removeRedundancy | Man page |
| replaceNAs | Man page |
| row2col | Man page |
| rowCATTs | Man page |
| rowChisq2Class | Man page |
| rowChisqMultiClass | Man page |
| rowChisqStats | Man page |
| rowCors | Man page |
| rowEpistatic | Man page Source code |
| rowFreqs | Man page |
| rowHWEs | Man page Source code |
| rowMAFs | Man page Source code |
| rowMsquares | Man page |
| rowScales | Man page |
| rowTables | Man page |
| rowTrendFuzzy | Man page Source code |
| rowTrendStats | Man page |
| sample.snpmat | Man page |
| shortenGeneDescription | Man page Source code |
| showChanges | Man page Source code |
| simulateSNPcatResponse | Man page Source code |
| simulateSNPglm | Man page |
| simulateSNPs | Man page |
| smc | Man page |
| smc2Mats | Man page |
| snp1norm2Mats | Man page Source code |
| snp2bin | Man page |
| summary.simSNPglm | Man page |
| weightMode | Man page |
