sfinx: Straightforward Filtering Index for AP-MS Data Analysis (SFINX)

The straightforward filtering index (SFINX) identifies true positive protein interactions in a fast, user-friendly, and highly accurate way. It is not only useful for the filtering of affinity purification - mass spectrometry (AP-MS) data, but also for similar types of data resulting from other co-complex interactomics technologies, such as TAP-MS, Virotrap and BioID. SFINX can also be used via the website interface at <http://sfinx.ugent.be>.

Install the latest version of this package by entering the following in R:
install.packages("sfinx")
AuthorKevin Titeca [aut, cre], Jan Tavernier [ths], Sven Eyckerman [ths]
Date of publication2016-12-23 00:07:04
MaintainerKevin Titeca <sfinxinteractomics@gmail.com>
LicenseApache License 2.0
Version1.7.9
http://sfinx.ugent.be

View on CRAN

Files

inst
inst/CITATION
inst/doc
inst/doc/sfinx-vignette.html
inst/doc/sfinx-vignette.Rmd
inst/doc/sfinx-vignette.R
tests
tests/testthat.R
tests/testthat
tests/testthat/testsfinx.R
NAMESPACE
data
data/BaitIdentityExampleFile.rda
data/DataInputExampleFile.rda
R
R/sfinxMain.R R/zzz.R
vignettes
vignettes/sfinx-vignette.Rmd
vignettes/man
vignettes/man/sfinx.Rd vignettes/man/DataInputExampleFile.Rd vignettes/man/BaitIdentityExampleFile.Rd
README.md
MD5
build
build/vignette.rds
DESCRIPTION
man
man/sfinx.Rd man/DataInputExampleFile.Rd man/BaitIdentityExampleFile.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

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