dataCheck: Checks if data is in correct format.

In sicegar: Analysis of Single-Cell Viral Growth Curves

Description

Checks if the input data is appropriate and if it is not, the function converts it into a suitable form. The input data frame should contain two columns named time and intensity related to time variable and intensity variable respectively. If the data frame is in a list its name in the list should be $timeIntensityData.

Usage

dataCheck(data, showDetails = TRUE)

Arguments

data	the input data. It can be either a list that contains a data frame in .$timeIntensityData or can be a data frame by itself.
showDetails	logical, if TRUE the function will provide an output "check done" if everything is OK. Default is FALSE

Examples

# Example 1

# generate data frame
time <- seq(3, 48, 0.5)
intensity <- runif(length(time), 3.0, 7.5)
dataInput <- data.frame(time, intensity)

# Apply dataCheck function
dataOutputVariable <- dataCheck(dataInput)

# Example 2

# generate data frame
time <- seq(3, 48, 0.5)
intensity <- runif(length(time), 3.0, 7.5)
dataInput <- data.frame(time, intensity)

# Normalize Data
dataOutput <- normalizeData(dataInput)
dataInput2 <- dataOutput

# Apply dataCheck function
dataOutputVariable2 <- dataCheck(dataInput2)

sicegar documentation built on May 8, 2021, 9:06 a.m.